Protein–RNA interactions for Protein: Q5S006

Lrrk2, Leucine-rich repeat serine/threonine-protein kinase 2, mousemouse

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrk2Q5S006 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lrrk2Q5S006 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lrrk2Q5S006 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lrrk2Q5S006 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lrrk2Q5S006 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.24□□□□□ -0.61
Lrrk2Q5S006 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lrrk2Q5S006 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lrrk2Q5S006 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Lrrk2Q5S006 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lrrk2Q5S006 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lrrk2Q5S006 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lrrk2Q5S006 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lrrk2Q5S006 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lrrk2Q5S006 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Lrrk2Q5S006 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lrrk2Q5S006 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lrrk2Q5S006 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lrrk2Q5S006 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lrrk2Q5S006 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lrrk2Q5S006 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.24□□□□□ -0.61
Lrrk2Q5S006 Gm14219-201ENSMUST00000120414 288 ntBASIC11.24□□□□□ -0.61
Lrrk2Q5S006 Gm4879-201ENSMUST00000122190 1272 ntBASIC11.24□□□□□ -0.61
Lrrk2Q5S006 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.24□□□□□ -0.61
Lrrk2Q5S006 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.24□□□□□ -0.61
Lrrk2Q5S006 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Lrrk2Q5S006 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
Lrrk2Q5S006 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC11.24□□□□□ -0.61
Lrrk2Q5S006 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Lrrk2Q5S006 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.24□□□□□ -0.61
Lrrk2Q5S006 Ap3s1-202ENSMUST00000224622 978 ntBASIC11.24□□□□□ -0.61
Lrrk2Q5S006 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lrrk2Q5S006 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Lrrk2Q5S006 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Lrrk2Q5S006 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lrrk2Q5S006 AC162938.1-201ENSMUST00000213140 2323 ntBASIC11.23□□□□□ -0.61
Lrrk2Q5S006 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lrrk2Q5S006 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lrrk2Q5S006 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Lrrk2Q5S006 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lrrk2Q5S006 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.23□□□□□ -0.61
Lrrk2Q5S006 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lrrk2Q5S006 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Lrrk2Q5S006 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lrrk2Q5S006 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC11.23□□□□□ -0.61
Lrrk2Q5S006 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lrrk2Q5S006 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Lrrk2Q5S006 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lrrk2Q5S006 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lrrk2Q5S006 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lrrk2Q5S006 Gm12196-201ENSMUST00000120954 262 ntBASIC11.23□□□□□ -0.61
Lrrk2Q5S006 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.23□□□□□ -0.61
Lrrk2Q5S006 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.23□□□□□ -0.61
Lrrk2Q5S006 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lrrk2Q5S006 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.23□□□□□ -0.61
Lrrk2Q5S006 Ighv1-86-201ENSMUST00000200562 353 ntBASIC11.23□□□□□ -0.61
Lrrk2Q5S006 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Lrrk2Q5S006 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC11.23□□□□□ -0.61
Lrrk2Q5S006 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Lrrk2Q5S006 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Lrrk2Q5S006 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.23□□□□□ -0.61
Lrrk2Q5S006 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Lrrk2Q5S006 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lrrk2Q5S006 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lrrk2Q5S006 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Lrrk2Q5S006 Gm25881-201ENSMUST00000157783 103 ntBASIC11.23□□□□□ -0.61
Lrrk2Q5S006 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lrrk2Q5S006 Gm45398-201ENSMUST00000210561 165 ntBASIC11.23□□□□□ -0.61
Lrrk2Q5S006 Gm14005-208ENSMUST00000223654 681 ntBASIC11.23□□□□□ -0.61
Lrrk2Q5S006 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lrrk2Q5S006 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lrrk2Q5S006 Gm9996-201ENSMUST00000070359 913 ntBASIC11.23□□□□□ -0.61
Lrrk2Q5S006 Gm25201-201ENSMUST00000083093 170 ntBASIC11.23□□□□□ -0.61
Lrrk2Q5S006 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.22□□□□□ -0.61
Lrrk2Q5S006 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.22□□□□□ -0.61
Lrrk2Q5S006 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lrrk2Q5S006 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lrrk2Q5S006 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lrrk2Q5S006 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lrrk2Q5S006 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lrrk2Q5S006 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lrrk2Q5S006 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lrrk2Q5S006 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lrrk2Q5S006 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lrrk2Q5S006 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lrrk2Q5S006 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lrrk2Q5S006 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lrrk2Q5S006 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lrrk2Q5S006 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lrrk2Q5S006 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lrrk2Q5S006 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lrrk2Q5S006 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC11.22□□□□□ -0.61
Lrrk2Q5S006 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC11.22□□□□□ -0.61
Lrrk2Q5S006 Gm14999-201ENSMUST00000121039 624 ntBASIC11.22□□□□□ -0.61
Lrrk2Q5S006 Gm10731-201ENSMUST00000181171 448 ntBASIC11.22□□□□□ -0.61
Lrrk2Q5S006 Gm44329-201ENSMUST00000197469 112 ntBASIC11.22□□□□□ -0.61
Lrrk2Q5S006 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lrrk2Q5S006 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.22□□□□□ -0.61
Lrrk2Q5S006 AC153505.1-201ENSMUST00000218819 1071 ntBASIC11.22□□□□□ -0.61
Lrrk2Q5S006 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Lrrk2Q5S006 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms