Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Gm42840-201ENSMUST00000200303 2251 ntBASIC10.08□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC10.08□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC10.08□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC10.08□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC10.08□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC10.08□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC10.08□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Gm44335-201ENSMUST00000196879 141 ntBASIC10.08□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Gm44297-201ENSMUST00000198304 141 ntBASIC10.08□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Gm44346-201ENSMUST00000198851 141 ntBASIC10.08□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC10.08□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC10.08□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Gm44292-201ENSMUST00000205194 2364 ntBASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 AC134335.2-201ENSMUST00000227660 440 ntBASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Gm42690-201ENSMUST00000197921 1836 ntBASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav15-1-dv6-1Q5R1D2 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms