Protein–RNA interactions for Protein: Q3URI6

Zfp560, Zinc finger protein 560, mousemouse

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp560Q3URI6 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.02□□□□□ -0.33
Zfp560Q3URI6 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Zfp560Q3URI6 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Zfp560Q3URI6 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Zfp560Q3URI6 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zfp560Q3URI6 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Zfp560Q3URI6 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zfp560Q3URI6 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.01□□□□□ -0.33
Zfp560Q3URI6 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zfp560Q3URI6 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zfp560Q3URI6 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zfp560Q3URI6 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zfp560Q3URI6 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Zfp560Q3URI6 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zfp560Q3URI6 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zfp560Q3URI6 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zfp560Q3URI6 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zfp560Q3URI6 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Zfp560Q3URI6 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Zfp560Q3URI6 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zfp560Q3URI6 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zfp560Q3URI6 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Zfp560Q3URI6 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zfp560Q3URI6 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.01□□□□□ -0.33
Zfp560Q3URI6 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zfp560Q3URI6 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.01□□□□□ -0.33
Zfp560Q3URI6 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zfp560Q3URI6 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zfp560Q3URI6 Gm40377-201ENSMUST00000204604 2015 ntBASIC13.01□□□□□ -0.33
Zfp560Q3URI6 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.01□□□□□ -0.33
Zfp560Q3URI6 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zfp560Q3URI6 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zfp560Q3URI6 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Zfp560Q3URI6 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zfp560Q3URI6 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zfp560Q3URI6 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zfp560Q3URI6 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Zfp560Q3URI6 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zfp560Q3URI6 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Zfp560Q3URI6 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zfp560Q3URI6 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zfp560Q3URI6 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zfp560Q3URI6 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Zfp560Q3URI6 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zfp560Q3URI6 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Zfp560Q3URI6 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13□□□□□ -0.33
Zfp560Q3URI6 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Zfp560Q3URI6 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Zfp560Q3URI6 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Zfp560Q3URI6 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Zfp560Q3URI6 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Zfp560Q3URI6 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Zfp560Q3URI6 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Zfp560Q3URI6 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Zfp560Q3URI6 Ssr1-203ENSMUST00000225246 1825 ntBASIC13□□□□□ -0.33
Zfp560Q3URI6 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13□□□□□ -0.33
Zfp560Q3URI6 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13□□□□□ -0.33
Zfp560Q3URI6 Gm8798-201ENSMUST00000211877 1661 ntBASIC13□□□□□ -0.33
Zfp560Q3URI6 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Zfp560Q3URI6 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Zfp560Q3URI6 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Zfp560Q3URI6 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Zfp560Q3URI6 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Zfp560Q3URI6 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13□□□□□ -0.33
Zfp560Q3URI6 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Zfp560Q3URI6 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13□□□□□ -0.33
Zfp560Q3URI6 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13□□□□□ -0.33
Zfp560Q3URI6 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13□□□□□ -0.33
Zfp560Q3URI6 Gm26185-201ENSMUST00000157692 266 ntBASIC13□□□□□ -0.33
Zfp560Q3URI6 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13□□□□□ -0.33
Zfp560Q3URI6 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Zfp560Q3URI6 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13□□□□□ -0.33
Zfp560Q3URI6 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13□□□□□ -0.33
Zfp560Q3URI6 Gm29127-201ENSMUST00000188304 517 ntBASIC13□□□□□ -0.33
Zfp560Q3URI6 Gm43433-201ENSMUST00000196573 481 ntBASIC13□□□□□ -0.33
Zfp560Q3URI6 Gm6266-201ENSMUST00000203844 806 ntBASIC13□□□□□ -0.33
Zfp560Q3URI6 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13□□□□□ -0.33
Zfp560Q3URI6 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13□□□□□ -0.33
Zfp560Q3URI6 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Zfp560Q3URI6 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Zfp560Q3URI6 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Zfp560Q3URI6 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13□□□□□ -0.33
Zfp560Q3URI6 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Zfp560Q3URI6 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Zfp560Q3URI6 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Zfp560Q3URI6 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Zfp560Q3URI6 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Zfp560Q3URI6 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13□□□□□ -0.33
Zfp560Q3URI6 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Zfp560Q3URI6 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13□□□□□ -0.33
Zfp560Q3URI6 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Zfp560Q3URI6 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Zfp560Q3URI6 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Zfp560Q3URI6 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13□□□□□ -0.33
Zfp560Q3URI6 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13□□□□□ -0.33
Zfp560Q3URI6 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Zfp560Q3URI6 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Zfp560Q3URI6 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Zfp560Q3URI6 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Zfp560Q3URI6 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms