Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43aQ3TL54 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43aQ3TL54 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43aQ3TL54 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43aQ3TL54 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.75□□□□□ -0.21
Trim43aQ3TL54 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43aQ3TL54 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43aQ3TL54 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trim43aQ3TL54 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43aQ3TL54 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43aQ3TL54 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43aQ3TL54 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trim43aQ3TL54 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43aQ3TL54 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43aQ3TL54 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim43aQ3TL54 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trim43aQ3TL54 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43aQ3TL54 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43aQ3TL54 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Trim43aQ3TL54 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43aQ3TL54 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43aQ3TL54 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43aQ3TL54 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trim43aQ3TL54 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.74□□□□□ -0.21
Trim43aQ3TL54 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43aQ3TL54 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43aQ3TL54 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Trim43aQ3TL54 Gm6447-201ENSMUST00000118905 835 ntBASIC13.74□□□□□ -0.21
Trim43aQ3TL54 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43aQ3TL54 Gm15376-201ENSMUST00000122258 783 ntBASIC13.74□□□□□ -0.21
Trim43aQ3TL54 Gm26464-201ENSMUST00000157094 305 ntBASIC13.74□□□□□ -0.21
Trim43aQ3TL54 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43aQ3TL54 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Trim43aQ3TL54 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43aQ3TL54 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.74□□□□□ -0.21
Trim43aQ3TL54 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43aQ3TL54 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43aQ3TL54 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43aQ3TL54 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43aQ3TL54 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43aQ3TL54 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43aQ3TL54 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43aQ3TL54 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.74□□□□□ -0.21
Trim43aQ3TL54 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43aQ3TL54 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43aQ3TL54 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43aQ3TL54 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43aQ3TL54 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43aQ3TL54 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43aQ3TL54 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trim43aQ3TL54 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43aQ3TL54 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim43aQ3TL54 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.74□□□□□ -0.21
Trim43aQ3TL54 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43aQ3TL54 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43aQ3TL54 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43aQ3TL54 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43aQ3TL54 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43aQ3TL54 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43aQ3TL54 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43aQ3TL54 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43aQ3TL54 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43aQ3TL54 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43aQ3TL54 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trim43aQ3TL54 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43aQ3TL54 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.73□□□□□ -0.21
Trim43aQ3TL54 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Trim43aQ3TL54 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Trim43aQ3TL54 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43aQ3TL54 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43aQ3TL54 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43aQ3TL54 Gm29667-201ENSMUST00000190817 490 ntBASIC13.73□□□□□ -0.21
Trim43aQ3TL54 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.73□□□□□ -0.21
Trim43aQ3TL54 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43aQ3TL54 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.73□□□□□ -0.21
Trim43aQ3TL54 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43aQ3TL54 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43aQ3TL54 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43aQ3TL54 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Trim43aQ3TL54 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43aQ3TL54 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trim43aQ3TL54 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Trim43aQ3TL54 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43aQ3TL54 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Trim43aQ3TL54 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.73□□□□□ -0.21
Trim43aQ3TL54 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43aQ3TL54 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trim43aQ3TL54 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43aQ3TL54 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43aQ3TL54 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43aQ3TL54 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43aQ3TL54 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43aQ3TL54 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trim43aQ3TL54 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.73□□□□□ -0.21
Trim43aQ3TL54 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.73□□□□□ -0.21
Trim43aQ3TL54 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43aQ3TL54 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim43aQ3TL54 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.73□□□□□ -0.21
Trim43aQ3TL54 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trim43aQ3TL54 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms