Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.15□□□□□ -0.3
Ebf1Q07802 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf1Q07802 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Ebf1Q07802 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.15□□□□□ -0.31
Ebf1Q07802 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.15□□□□□ -0.31
Ebf1Q07802 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ebf1Q07802 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf1Q07802 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Ebf1Q07802 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Ebf1Q07802 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf1Q07802 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf1Q07802 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
Ebf1Q07802 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf1Q07802 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.14□□□□□ -0.31
Ebf1Q07802 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf1Q07802 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.14□□□□□ -0.31
Ebf1Q07802 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf1Q07802 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC13.14□□□□□ -0.31
Ebf1Q07802 Gm11964-201ENSMUST00000120982 444 ntBASIC13.14□□□□□ -0.31
Ebf1Q07802 Gm16479-201ENSMUST00000121706 932 ntBASIC13.14□□□□□ -0.31
Ebf1Q07802 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf1Q07802 Mir7070-201ENSMUST00000183657 86 ntBASIC13.14□□□□□ -0.31
Ebf1Q07802 Gm18753-201ENSMUST00000201000 566 ntBASIC13.14□□□□□ -0.31
Ebf1Q07802 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.14□□□□□ -0.31
Ebf1Q07802 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf1Q07802 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf1Q07802 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf1Q07802 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Ebf1Q07802 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf1Q07802 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.14□□□□□ -0.31
Ebf1Q07802 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf1Q07802 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.14□□□□□ -0.31
Ebf1Q07802 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Ebf1Q07802 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf1Q07802 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf1Q07802 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf1Q07802 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ebf1Q07802 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Ebf1Q07802 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf1Q07802 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC13.13□□□□□ -0.31
Ebf1Q07802 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf1Q07802 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Ebf1Q07802 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf1Q07802 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf1Q07802 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
Ebf1Q07802 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf1Q07802 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf1Q07802 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf1Q07802 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf1Q07802 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Ebf1Q07802 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Ebf1Q07802 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ebf1Q07802 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ebf1Q07802 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.13□□□□□ -0.31
Ebf1Q07802 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf1Q07802 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.13□□□□□ -0.31
Ebf1Q07802 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf1Q07802 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC13.13□□□□□ -0.31
Ebf1Q07802 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf1Q07802 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.13□□□□□ -0.31
Ebf1Q07802 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.13□□□□□ -0.31
Ebf1Q07802 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf1Q07802 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.13□□□□□ -0.31
Ebf1Q07802 Gm2383-201ENSMUST00000181461 807 ntBASIC13.13□□□□□ -0.31
Ebf1Q07802 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf1Q07802 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.13□□□□□ -0.31
Ebf1Q07802 Gm5781-201ENSMUST00000219792 443 ntBASIC13.13□□□□□ -0.31
Ebf1Q07802 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.13□□□□□ -0.31
Ebf1Q07802 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf1Q07802 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf1Q07802 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Ebf1Q07802 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf1Q07802 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf1Q07802 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Ebf1Q07802 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf1Q07802 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf1Q07802 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf1Q07802 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf1Q07802 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf1Q07802 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf1Q07802 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf1Q07802 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Ebf1Q07802 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf1Q07802 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf1Q07802 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf1Q07802 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf1Q07802 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf1Q07802 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf1Q07802 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ebf1Q07802 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf1Q07802 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.12□□□□□ -0.31
Ebf1Q07802 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf1Q07802 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.12□□□□□ -0.31
Ebf1Q07802 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Ebf1Q07802 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf1Q07802 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf1Q07802 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.12□□□□□ -0.31
Ebf1Q07802 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf1Q07802 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf1Q07802 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms