Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Sssca1P56873 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sssca1P56873 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Sssca1P56873 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Sssca1P56873 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC10.47□□□□□ -0.73
Sssca1P56873 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Sssca1P56873 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Sssca1P56873 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Sssca1P56873 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sssca1P56873 Gm44985-201ENSMUST00000206202 1016 ntBASIC10.47□□□□□ -0.73
Sssca1P56873 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC10.47□□□□□ -0.73
Sssca1P56873 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC10.47□□□□□ -0.73
Sssca1P56873 Gm9063-201ENSMUST00000223299 582 ntBASIC10.47□□□□□ -0.73
Sssca1P56873 AC134335.2-201ENSMUST00000227660 440 ntBASIC10.47□□□□□ -0.73
Sssca1P56873 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
Sssca1P56873 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Sssca1P56873 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC10.47□□□□□ -0.73
Sssca1P56873 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sssca1P56873 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sssca1P56873 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC10.47□□□□□ -0.73
Sssca1P56873 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sssca1P56873 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC10.47□□□□□ -0.73
Sssca1P56873 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sssca1P56873 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sssca1P56873 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sssca1P56873 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sssca1P56873 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC10.46□□□□□ -0.73
Sssca1P56873 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sssca1P56873 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Sssca1P56873 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sssca1P56873 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC10.46□□□□□ -0.73
Sssca1P56873 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Sssca1P56873 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Sssca1P56873 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sssca1P56873 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sssca1P56873 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sssca1P56873 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sssca1P56873 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sssca1P56873 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sssca1P56873 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sssca1P56873 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC10.46□□□□□ -0.73
Sssca1P56873 Gm27702-201ENSMUST00000184512 56 ntBASIC10.46□□□□□ -0.73
Sssca1P56873 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Sssca1P56873 Gm43094-201ENSMUST00000196549 921 ntBASIC10.46□□□□□ -0.73
Sssca1P56873 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC10.46□□□□□ -0.73
Sssca1P56873 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sssca1P56873 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Sssca1P56873 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Sssca1P56873 AC139580.1-202ENSMUST00000223574 928 ntBASIC10.46□□□□□ -0.73
Sssca1P56873 AC238811.1-201ENSMUST00000225302 441 ntBASIC10.46□□□□□ -0.73
Sssca1P56873 AC138604.1-201ENSMUST00000226969 739 ntBASIC10.46□□□□□ -0.73
Sssca1P56873 AC154276.1-201ENSMUST00000228874 1299 ntBASIC10.46□□□□□ -0.73
Sssca1P56873 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sssca1P56873 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sssca1P56873 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Sssca1P56873 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sssca1P56873 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sssca1P56873 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Sssca1P56873 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sssca1P56873 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sssca1P56873 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sssca1P56873 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sssca1P56873 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sssca1P56873 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC10.46□□□□□ -0.74
Sssca1P56873 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sssca1P56873 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.46□□□□□ -0.74
Sssca1P56873 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sssca1P56873 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sssca1P56873 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sssca1P56873 Pck2-205ENSMUST00000226352 2784 ntBASIC10.46□□□□□ -0.74
Sssca1P56873 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sssca1P56873 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sssca1P56873 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sssca1P56873 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sssca1P56873 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Sssca1P56873 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sssca1P56873 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Sssca1P56873 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Sssca1P56873 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sssca1P56873 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sssca1P56873 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sssca1P56873 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sssca1P56873 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sssca1P56873 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sssca1P56873 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sssca1P56873 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sssca1P56873 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sssca1P56873 Zkscan3-207ENSMUST00000223831 2101 ntBASIC10.45□□□□□ -0.74
Sssca1P56873 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sssca1P56873 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Sssca1P56873 Gm37269-201ENSMUST00000193906 1891 ntBASIC10.45□□□□□ -0.74
Sssca1P56873 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sssca1P56873 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sssca1P56873 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sssca1P56873 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sssca1P56873 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sssca1P56873 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Sssca1P56873 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Sssca1P56873 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sssca1P56873 AC096628.2-201ENSMUST00000225443 1413 ntBASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms