Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps4bP46467 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps4bP46467 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps4bP46467 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Vps4bP46467 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps4bP46467 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps4bP46467 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps4bP46467 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps4bP46467 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps4bP46467 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.16□□□□□ -0.3
Vps4bP46467 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Vps4bP46467 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps4bP46467 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps4bP46467 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps4bP46467 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps4bP46467 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Vps4bP46467 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vps4bP46467 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Vps4bP46467 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Vps4bP46467 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Vps4bP46467 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps4bP46467 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps4bP46467 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Vps4bP46467 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vps4bP46467 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Vps4bP46467 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Vps4bP46467 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.15□□□□□ -0.3
Vps4bP46467 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.15□□□□□ -0.3
Vps4bP46467 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.15□□□□□ -0.3
Vps4bP46467 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps4bP46467 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps4bP46467 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Vps4bP46467 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Vps4bP46467 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Vps4bP46467 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps4bP46467 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps4bP46467 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps4bP46467 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps4bP46467 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps4bP46467 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Vps4bP46467 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps4bP46467 Gm5687-201ENSMUST00000118252 640 ntBASIC13.15□□□□□ -0.3
Vps4bP46467 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.15□□□□□ -0.3
Vps4bP46467 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.15□□□□□ -0.3
Vps4bP46467 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.15□□□□□ -0.3
Vps4bP46467 Mir7654-201ENSMUST00000185082 70 ntBASIC13.15□□□□□ -0.3
Vps4bP46467 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps4bP46467 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.15□□□□□ -0.3
Vps4bP46467 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC13.15□□□□□ -0.3
Vps4bP46467 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.15□□□□□ -0.3
Vps4bP46467 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps4bP46467 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps4bP46467 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps4bP46467 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.15□□□□□ -0.3
Vps4bP46467 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps4bP46467 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Vps4bP46467 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps4bP46467 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vps4bP46467 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Vps4bP46467 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Vps4bP46467 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Vps4bP46467 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.14□□□□□ -0.31
Vps4bP46467 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps4bP46467 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.14□□□□□ -0.31
Vps4bP46467 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps4bP46467 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vps4bP46467 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Vps4bP46467 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vps4bP46467 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps4bP46467 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps4bP46467 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps4bP46467 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps4bP46467 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps4bP46467 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.14□□□□□ -0.31
Vps4bP46467 Gm13829-201ENSMUST00000119600 138 ntBASIC13.14□□□□□ -0.31
Vps4bP46467 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vps4bP46467 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vps4bP46467 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.14□□□□□ -0.31
Vps4bP46467 Gm9908-201ENSMUST00000211534 448 ntBASIC13.14□□□□□ -0.31
Vps4bP46467 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.14□□□□□ -0.31
Vps4bP46467 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.14□□□□□ -0.31
Vps4bP46467 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps4bP46467 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps4bP46467 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps4bP46467 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.14□□□□□ -0.31
Vps4bP46467 Gm16372-201ENSMUST00000073088 450 ntBASIC13.14□□□□□ -0.31
Vps4bP46467 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.14□□□□□ -0.31
Vps4bP46467 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps4bP46467 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vps4bP46467 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Vps4bP46467 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Vps4bP46467 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Vps4bP46467 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps4bP46467 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vps4bP46467 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps4bP46467 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps4bP46467 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Vps4bP46467 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vps4bP46467 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.14□□□□□ -0.31
Vps4bP46467 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms