Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col8a2P25318 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col8a2P25318 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Col8a2P25318 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col8a2P25318 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Col8a2P25318 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC10.8□□□□□ -0.68
Col8a2P25318 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC10.8□□□□□ -0.68
Col8a2P25318 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a2P25318 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
Col8a2P25318 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC10.8□□□□□ -0.68
Col8a2P25318 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a2P25318 Gm18222-201ENSMUST00000202416 1387 ntBASIC10.8□□□□□ -0.68
Col8a2P25318 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a2P25318 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a2P25318 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a2P25318 AC137842.1-201ENSMUST00000227896 2064 ntBASIC10.8□□□□□ -0.68
Col8a2P25318 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a2P25318 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a2P25318 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC10.8□□□□□ -0.68
Col8a2P25318 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
Col8a2P25318 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC10.8□□□□□ -0.68
Col8a2P25318 Gm12502-201ENSMUST00000120197 444 ntBASIC10.8□□□□□ -0.68
Col8a2P25318 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC10.8□□□□□ -0.68
Col8a2P25318 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a2P25318 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a2P25318 Gm9061-201ENSMUST00000182707 1006 ntBASIC10.8□□□□□ -0.68
Col8a2P25318 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a2P25318 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC10.8□□□□□ -0.68
Col8a2P25318 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a2P25318 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a2P25318 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a2P25318 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a2P25318 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a2P25318 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a2P25318 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Col8a2P25318 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Col8a2P25318 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a2P25318 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a2P25318 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a2P25318 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a2P25318 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a2P25318 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Col8a2P25318 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a2P25318 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Col8a2P25318 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a2P25318 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a2P25318 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a2P25318 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a2P25318 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a2P25318 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a2P25318 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a2P25318 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col8a2P25318 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Col8a2P25318 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col8a2P25318 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Col8a2P25318 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col8a2P25318 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC10.79□□□□□ -0.68
Col8a2P25318 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col8a2P25318 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Col8a2P25318 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col8a2P25318 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC10.79□□□□□ -0.68
Col8a2P25318 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col8a2P25318 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC10.79□□□□□ -0.68
Col8a2P25318 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Col8a2P25318 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Col8a2P25318 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Col8a2P25318 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col8a2P25318 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC10.79□□□□□ -0.68
Col8a2P25318 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Col8a2P25318 Gm43179-201ENSMUST00000198797 275 ntBASIC10.79□□□□□ -0.68
Col8a2P25318 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC10.79□□□□□ -0.68
Col8a2P25318 Gm4768-201ENSMUST00000206199 686 ntBASIC10.79□□□□□ -0.68
Col8a2P25318 Gm6013-201ENSMUST00000212264 699 ntBASIC10.79□□□□□ -0.68
Col8a2P25318 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC10.79□□□□□ -0.68
Col8a2P25318 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC10.79□□□□□ -0.68
Col8a2P25318 AC135669.1-202ENSMUST00000216742 540 ntBASIC10.79□□□□□ -0.68
Col8a2P25318 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC10.79□□□□□ -0.68
Col8a2P25318 AC154462.2-201ENSMUST00000227519 370 ntBASIC10.79□□□□□ -0.68
Col8a2P25318 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Col8a2P25318 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Col8a2P25318 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC10.79□□□□□ -0.68
Col8a2P25318 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col8a2P25318 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Col8a2P25318 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Col8a2P25318 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Col8a2P25318 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col8a2P25318 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Col8a2P25318 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col8a2P25318 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col8a2P25318 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col8a2P25318 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col8a2P25318 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col8a2P25318 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col8a2P25318 Gm15897-201ENSMUST00000117770 1486 ntBASIC10.79□□□□□ -0.68
Col8a2P25318 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Col8a2P25318 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col8a2P25318 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Col8a2P25318 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC10.79□□□□□ -0.68
Col8a2P25318 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col8a2P25318 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms