Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf1bP25119 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf1bP25119 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf1bP25119 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf1bP25119 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf1bP25119 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfrsf1bP25119 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.01□□□□□ -0.49
Tnfrsf1bP25119 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Tnfrsf1bP25119 Gm8798-201ENSMUST00000211877 1661 ntBASIC12□□□□□ -0.49
Tnfrsf1bP25119 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf1bP25119 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf1bP25119 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf1bP25119 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf1bP25119 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf1bP25119 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12□□□□□ -0.49
Tnfrsf1bP25119 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf1bP25119 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf1bP25119 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Tnfrsf1bP25119 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf1bP25119 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf1bP25119 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf1bP25119 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12□□□□□ -0.49
Tnfrsf1bP25119 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Tnfrsf1bP25119 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12□□□□□ -0.49
Tnfrsf1bP25119 Gm11637-201ENSMUST00000120601 592 ntBASIC12□□□□□ -0.49
Tnfrsf1bP25119 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12□□□□□ -0.49
Tnfrsf1bP25119 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf1bP25119 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf1bP25119 Gm9061-201ENSMUST00000182707 1006 ntBASIC12□□□□□ -0.49
Tnfrsf1bP25119 Gm5896-201ENSMUST00000189662 1024 ntBASIC12□□□□□ -0.49
Tnfrsf1bP25119 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12□□□□□ -0.49
Tnfrsf1bP25119 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Tnfrsf1bP25119 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12□□□□□ -0.49
Tnfrsf1bP25119 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf1bP25119 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Tnfrsf1bP25119 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12□□□□□ -0.49
Tnfrsf1bP25119 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf1bP25119 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf1bP25119 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf1bP25119 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf1bP25119 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf1bP25119 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf1bP25119 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf1bP25119 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf1bP25119 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf1bP25119 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12□□□□□ -0.49
Tnfrsf1bP25119 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf1bP25119 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Tnfrsf1bP25119 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Tnfrsf1bP25119 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.99□□□□□ -0.49
Tnfrsf1bP25119 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1bP25119 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1bP25119 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1bP25119 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1bP25119 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1bP25119 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1bP25119 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1bP25119 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1bP25119 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1bP25119 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1bP25119 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1bP25119 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Tnfrsf1bP25119 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1bP25119 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Tnfrsf1bP25119 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Tnfrsf1bP25119 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Tnfrsf1bP25119 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Tnfrsf1bP25119 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.99□□□□□ -0.49
Tnfrsf1bP25119 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1bP25119 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.99□□□□□ -0.49
Tnfrsf1bP25119 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1bP25119 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.99□□□□□ -0.49
Tnfrsf1bP25119 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1bP25119 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.99□□□□□ -0.49
Tnfrsf1bP25119 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.99□□□□□ -0.49
Tnfrsf1bP25119 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1bP25119 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.99□□□□□ -0.49
Tnfrsf1bP25119 Gm17208-201ENSMUST00000168388 535 ntBASIC11.99□□□□□ -0.49
Tnfrsf1bP25119 Gm7029-201ENSMUST00000173226 450 ntBASIC11.99□□□□□ -0.49
Tnfrsf1bP25119 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1bP25119 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.99□□□□□ -0.49
Tnfrsf1bP25119 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1bP25119 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1bP25119 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.99□□□□□ -0.49
Tnfrsf1bP25119 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1bP25119 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1bP25119 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Tnfrsf1bP25119 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1bP25119 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1bP25119 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1bP25119 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1bP25119 Gm45251-201ENSMUST00000209486 1465 ntBASIC11.99□□□□□ -0.49
Tnfrsf1bP25119 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.99□□□□□ -0.49
Tnfrsf1bP25119 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1bP25119 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1bP25119 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.99□□□□□ -0.49
Tnfrsf1bP25119 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1bP25119 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1bP25119 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1bP25119 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms