Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Gstp-ps-201ENSMUST00000195526 631 ntBASIC13.33□□□□□ -0.28
Hoxd8P23463 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC13.33□□□□□ -0.28
Hoxd8P23463 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxd8P23463 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxd8P23463 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Hoxd8P23463 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxd8P23463 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxd8P23463 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxd8P23463 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxd8P23463 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxd8P23463 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxd8P23463 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxd8P23463 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxd8P23463 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.33□□□□□ -0.28
Hoxd8P23463 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxd8P23463 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxd8P23463 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Hoxd8P23463 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxd8P23463 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxd8P23463 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxd8P23463 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxd8P23463 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxd8P23463 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxd8P23463 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.32□□□□□ -0.28
Hoxd8P23463 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxd8P23463 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxd8P23463 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Hoxd8P23463 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Hoxd8P23463 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxd8P23463 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxd8P23463 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxd8P23463 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxd8P23463 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxd8P23463 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Hoxd8P23463 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Hoxd8P23463 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxd8P23463 Gm7857-201ENSMUST00000117957 358 ntBASIC13.32□□□□□ -0.28
Hoxd8P23463 Gm14363-201ENSMUST00000122304 409 ntBASIC13.32□□□□□ -0.28
Hoxd8P23463 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Hoxd8P23463 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC13.32□□□□□ -0.28
Hoxd8P23463 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC13.32□□□□□ -0.28
Hoxd8P23463 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Hoxd8P23463 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxd8P23463 Gm6546-201ENSMUST00000192096 766 ntBASIC13.32□□□□□ -0.28
Hoxd8P23463 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC13.32□□□□□ -0.28
Hoxd8P23463 Gm39404-201ENSMUST00000216350 313 ntBASIC13.32□□□□□ -0.28
Hoxd8P23463 Gm18363-201ENSMUST00000221671 730 ntBASIC13.32□□□□□ -0.28
Hoxd8P23463 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.32□□□□□ -0.28
Hoxd8P23463 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxd8P23463 Gm10312-201ENSMUST00000078515 489 ntBASIC13.32□□□□□ -0.28
Hoxd8P23463 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxd8P23463 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxd8P23463 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxd8P23463 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.32□□□□□ -0.28
Hoxd8P23463 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxd8P23463 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.32□□□□□ -0.28
Hoxd8P23463 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxd8P23463 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxd8P23463 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Hoxd8P23463 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxd8P23463 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxd8P23463 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxd8P23463 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxd8P23463 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Hoxd8P23463 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxd8P23463 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxd8P23463 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxd8P23463 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxd8P23463 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Hoxd8P23463 Gm43908-201ENSMUST00000205074 1472 ntBASIC13.31□□□□□ -0.28
Hoxd8P23463 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxd8P23463 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxd8P23463 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxd8P23463 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxd8P23463 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxd8P23463 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Hoxd8P23463 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC13.31□□□□□ -0.28
Hoxd8P23463 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxd8P23463 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxd8P23463 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxd8P23463 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13.31□□□□□ -0.28
Hoxd8P23463 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.31□□□□□ -0.28
Hoxd8P23463 Gm5523-201ENSMUST00000180415 997 ntBASIC13.31□□□□□ -0.28
Hoxd8P23463 Gm8856-201ENSMUST00000185254 1144 ntBASIC13.31□□□□□ -0.28
Hoxd8P23463 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC13.31□□□□□ -0.28
Hoxd8P23463 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxd8P23463 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxd8P23463 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC13.31□□□□□ -0.28
Hoxd8P23463 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Hoxd8P23463 AC125209.1-201ENSMUST00000225812 766 ntBASIC13.31□□□□□ -0.28
Hoxd8P23463 AC102523.2-201ENSMUST00000227813 983 ntBASIC13.31□□□□□ -0.28
Hoxd8P23463 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxd8P23463 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxd8P23463 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxd8P23463 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxd8P23463 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxd8P23463 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxd8P23463 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Hoxd8P23463 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxd8P23463 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms