Protein–RNA interactions for Protein: P09084

Pax1, Paired box protein Pax-1, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pax1P09084 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pax1P09084 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pax1P09084 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pax1P09084 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pax1P09084 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pax1P09084 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pax1P09084 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pax1P09084 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pax1P09084 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pax1P09084 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pax1P09084 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
Pax1P09084 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pax1P09084 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pax1P09084 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pax1P09084 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pax1P09084 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Pax1P09084 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pax1P09084 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pax1P09084 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pax1P09084 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pax1P09084 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pax1P09084 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Pax1P09084 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pax1P09084 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pax1P09084 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pax1P09084 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pax1P09084 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Pax1P09084 Gm5320-201ENSMUST00000207163 1519 ntBASIC10.65□□□□□ -0.7
Pax1P09084 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Pax1P09084 Gm45266-201ENSMUST00000210111 2173 ntBASIC10.65□□□□□ -0.7
Pax1P09084 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pax1P09084 Gm44292-201ENSMUST00000205194 2364 ntBASIC10.65□□□□□ -0.7
Pax1P09084 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pax1P09084 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
Pax1P09084 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Pax1P09084 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pax1P09084 Gm23935-201ENSMUST00000102303 57 ntBASIC10.65□□□□□ -0.7
Pax1P09084 Gm24270-201ENSMUST00000102326 57 ntBASIC10.65□□□□□ -0.7
Pax1P09084 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Pax1P09084 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pax1P09084 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC10.65□□□□□ -0.7
Pax1P09084 Gm13886-201ENSMUST00000117876 1183 ntBASIC10.65□□□□□ -0.7
Pax1P09084 Gm15693-201ENSMUST00000120470 637 ntBASIC10.65□□□□□ -0.7
Pax1P09084 Gm15393-201ENSMUST00000120499 219 ntBASIC10.65□□□□□ -0.7
Pax1P09084 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
Pax1P09084 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
Pax1P09084 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC10.65□□□□□ -0.7
Pax1P09084 Gm24245-201ENSMUST00000157318 57 ntBASIC10.65□□□□□ -0.7
Pax1P09084 Gm6736-201ENSMUST00000166583 948 ntBASIC10.65□□□□□ -0.7
Pax1P09084 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Pax1P09084 Gm27622-201ENSMUST00000183779 60 ntBASIC10.65□□□□□ -0.7
Pax1P09084 Gm37576-201ENSMUST00000194228 372 ntBASIC10.65□□□□□ -0.7
Pax1P09084 Gm37638-201ENSMUST00000194337 1123 ntBASIC10.65□□□□□ -0.7
Pax1P09084 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC10.65□□□□□ -0.7
Pax1P09084 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC10.65□□□□□ -0.7
Pax1P09084 Gm43575-201ENSMUST00000196420 516 ntBASIC10.65□□□□□ -0.7
Pax1P09084 Gm19931-201ENSMUST00000198920 368 ntBASIC10.65□□□□□ -0.7
Pax1P09084 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC10.65□□□□□ -0.7
Pax1P09084 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC10.65□□□□□ -0.7
Pax1P09084 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pax1P09084 AC153932.1-201ENSMUST00000218558 787 ntBASIC10.65□□□□□ -0.7
Pax1P09084 AC131743.3-201ENSMUST00000222099 662 ntBASIC10.65□□□□□ -0.7
Pax1P09084 Gm9229-201ENSMUST00000222777 126 ntBASIC10.65□□□□□ -0.7
Pax1P09084 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Pax1P09084 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pax1P09084 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC10.65□□□□□ -0.7
Pax1P09084 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Pax1P09084 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pax1P09084 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pax1P09084 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pax1P09084 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pax1P09084 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pax1P09084 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pax1P09084 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pax1P09084 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pax1P09084 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC10.65□□□□□ -0.7
Pax1P09084 Gm13722-201ENSMUST00000117964 3066 ntBASIC10.65□□□□□ -0.7
Pax1P09084 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10.65□□□□□ -0.7
Pax1P09084 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Pax1P09084 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC10.65□□□□□ -0.7
Pax1P09084 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Pax1P09084 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
Pax1P09084 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Pax1P09084 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Pax1P09084 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC10.65□□□□□ -0.71
Pax1P09084 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Pax1P09084 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pax1P09084 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pax1P09084 AC161252.3-201ENSMUST00000225465 1549 ntBASIC10.64□□□□□ -0.71
Pax1P09084 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pax1P09084 AC154767.3-201ENSMUST00000225150 1342 ntBASIC10.64□□□□□ -0.71
Pax1P09084 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Pax1P09084 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC10.64□□□□□ -0.71
Pax1P09084 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC10.64□□□□□ -0.71
Pax1P09084 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pax1P09084 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC10.64□□□□□ -0.71
Pax1P09084 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pax1P09084 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Pax1P09084 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Pax1P09084 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms