Protein–RNA interactions for Protein: P01643

Ig kappa chain V-V region MOPC 173, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01643 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC10.28□□□□□ -0.76
P01643 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC10.28□□□□□ -0.76
P01643 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC10.28□□□□□ -0.76
P01643 Morn2-202ENSMUST00000227729 656 ntBASIC10.28□□□□□ -0.76
P01643 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
P01643 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
P01643 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
P01643 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
P01643 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
P01643 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
P01643 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
P01643 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
P01643 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
P01643 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
P01643 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
P01643 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
P01643 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
P01643 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
P01643 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
P01643 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
P01643 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
P01643 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
P01643 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
P01643 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
P01643 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
P01643 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
P01643 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
P01643 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
P01643 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
P01643 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
P01643 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
P01643 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
P01643 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
P01643 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
P01643 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
P01643 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.76
P01643 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
P01643 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC10.27□□□□□ -0.76
P01643 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.76
P01643 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
P01643 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P01643 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P01643 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
P01643 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P01643 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
P01643 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC10.27□□□□□ -0.77
P01643 Gm14381-201ENSMUST00000122105 414 ntBASIC10.27□□□□□ -0.77
P01643 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
P01643 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
P01643 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC10.27□□□□□ -0.77
P01643 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
P01643 Gm38241-201ENSMUST00000192641 898 ntBASIC10.27□□□□□ -0.77
P01643 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
P01643 Gm44772-201ENSMUST00000207623 1191 ntBASIC10.27□□□□□ -0.77
P01643 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC10.27□□□□□ -0.77
P01643 Gm5904-201ENSMUST00000210286 865 ntBASIC10.27□□□□□ -0.77
P01643 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC10.27□□□□□ -0.77
P01643 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC10.27□□□□□ -0.77
P01643 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P01643 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P01643 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
P01643 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
P01643 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P01643 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
P01643 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
P01643 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P01643 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
P01643 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC10.27□□□□□ -0.77
P01643 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
P01643 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
P01643 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC10.27□□□□□ -0.77
P01643 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC10.27□□□□□ -0.77
P01643 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
P01643 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
P01643 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.77
P01643 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P01643 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.77
P01643 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P01643 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
P01643 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P01643 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P01643 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P01643 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
P01643 AC122314.1-201ENSMUST00000223056 2239 ntBASIC10.26□□□□□ -0.77
P01643 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
P01643 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P01643 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P01643 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P01643 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
P01643 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P01643 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P01643 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
P01643 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
P01643 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P01643 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
P01643 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
P01643 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
P01643 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P01643 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P01643 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms