Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.42□□□□□ -0.42
Hcn1O88704 Gm5035-201ENSMUST00000215581 927 ntBASIC12.42□□□□□ -0.42
Hcn1O88704 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.42□□□□□ -0.42
Hcn1O88704 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hcn1O88704 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Hcn1O88704 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hcn1O88704 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hcn1O88704 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hcn1O88704 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hcn1O88704 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hcn1O88704 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hcn1O88704 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hcn1O88704 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hcn1O88704 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Hcn1O88704 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hcn1O88704 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hcn1O88704 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hcn1O88704 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hcn1O88704 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hcn1O88704 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hcn1O88704 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hcn1O88704 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hcn1O88704 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hcn1O88704 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.41□□□□□ -0.42
Hcn1O88704 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hcn1O88704 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hcn1O88704 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Hcn1O88704 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hcn1O88704 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hcn1O88704 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hcn1O88704 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.41□□□□□ -0.42
Hcn1O88704 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hcn1O88704 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hcn1O88704 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.41□□□□□ -0.42
Hcn1O88704 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hcn1O88704 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.41□□□□□ -0.42
Hcn1O88704 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hcn1O88704 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hcn1O88704 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hcn1O88704 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hcn1O88704 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hcn1O88704 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Hcn1O88704 Mir1894-201ENSMUST00000122802 81 ntBASIC12.41□□□□□ -0.42
Hcn1O88704 Gm6244-201ENSMUST00000178732 841 ntBASIC12.41□□□□□ -0.42
Hcn1O88704 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.41□□□□□ -0.42
Hcn1O88704 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hcn1O88704 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hcn1O88704 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hcn1O88704 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hcn1O88704 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.41□□□□□ -0.42
Hcn1O88704 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hcn1O88704 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hcn1O88704 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hcn1O88704 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hcn1O88704 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.41□□□□□ -0.42
Hcn1O88704 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hcn1O88704 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hcn1O88704 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hcn1O88704 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hcn1O88704 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.41□□□□□ -0.42
Hcn1O88704 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.41□□□□□ -0.42
Hcn1O88704 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hcn1O88704 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hcn1O88704 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hcn1O88704 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hcn1O88704 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hcn1O88704 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hcn1O88704 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hcn1O88704 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Hcn1O88704 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hcn1O88704 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.4□□□□□ -0.42
Hcn1O88704 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hcn1O88704 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Hcn1O88704 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Hcn1O88704 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hcn1O88704 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.4□□□□□ -0.42
Hcn1O88704 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hcn1O88704 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.4□□□□□ -0.42
Hcn1O88704 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hcn1O88704 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.4□□□□□ -0.42
Hcn1O88704 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.4□□□□□ -0.42
Hcn1O88704 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hcn1O88704 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hcn1O88704 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.4□□□□□ -0.42
Hcn1O88704 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hcn1O88704 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.4□□□□□ -0.42
Hcn1O88704 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hcn1O88704 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hcn1O88704 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.4□□□□□ -0.42
Hcn1O88704 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.4□□□□□ -0.42
Hcn1O88704 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.4□□□□□ -0.42
Hcn1O88704 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.4□□□□□ -0.42
Hcn1O88704 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hcn1O88704 Gm7287-201ENSMUST00000205267 602 ntBASIC12.4□□□□□ -0.42
Hcn1O88704 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hcn1O88704 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.4□□□□□ -0.42
Hcn1O88704 Gm17794-201ENSMUST00000220252 955 ntBASIC12.4□□□□□ -0.42
Hcn1O88704 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hcn1O88704 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hcn1O88704 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms