Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Kcnu1O54982 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Kcnu1O54982 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Kcnu1O54982 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Kcnu1O54982 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Kcnu1O54982 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Kcnu1O54982 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Kcnu1O54982 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Kcnu1O54982 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.77□□□□□ -0.21
Kcnu1O54982 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Kcnu1O54982 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.76□□□□□ -0.21
Kcnu1O54982 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Kcnu1O54982 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Kcnu1O54982 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Kcnu1O54982 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Kcnu1O54982 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Kcnu1O54982 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Kcnu1O54982 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.76□□□□□ -0.21
Kcnu1O54982 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Kcnu1O54982 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Kcnu1O54982 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Kcnu1O54982 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Kcnu1O54982 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Kcnu1O54982 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Kcnu1O54982 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Kcnu1O54982 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Kcnu1O54982 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Kcnu1O54982 Gm11918-201ENSMUST00000121660 179 ntBASIC13.76□□□□□ -0.21
Kcnu1O54982 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Kcnu1O54982 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Kcnu1O54982 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Kcnu1O54982 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Kcnu1O54982 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Kcnu1O54982 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.76□□□□□ -0.21
Kcnu1O54982 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.76□□□□□ -0.21
Kcnu1O54982 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.76□□□□□ -0.21
Kcnu1O54982 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Kcnu1O54982 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Kcnu1O54982 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Kcnu1O54982 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Kcnu1O54982 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Kcnu1O54982 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.76□□□□□ -0.21
Kcnu1O54982 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Kcnu1O54982 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Kcnu1O54982 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Kcnu1O54982 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Kcnu1O54982 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Kcnu1O54982 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.76□□□□□ -0.21
Kcnu1O54982 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Kcnu1O54982 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.75□□□□□ -0.21
Kcnu1O54982 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.75□□□□□ -0.21
Kcnu1O54982 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Kcnu1O54982 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Kcnu1O54982 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.75□□□□□ -0.21
Kcnu1O54982 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.75□□□□□ -0.21
Kcnu1O54982 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Kcnu1O54982 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Kcnu1O54982 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Kcnu1O54982 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Kcnu1O54982 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Kcnu1O54982 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Kcnu1O54982 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Kcnu1O54982 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.75□□□□□ -0.21
Kcnu1O54982 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.75□□□□□ -0.21
Kcnu1O54982 Gm13813-201ENSMUST00000120998 787 ntBASIC13.75□□□□□ -0.21
Kcnu1O54982 Gm12291-201ENSMUST00000121627 311 ntBASIC13.75□□□□□ -0.21
Kcnu1O54982 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.75□□□□□ -0.21
Kcnu1O54982 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.75□□□□□ -0.21
Kcnu1O54982 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.75□□□□□ -0.21
Kcnu1O54982 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.75□□□□□ -0.21
Kcnu1O54982 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.75□□□□□ -0.21
Kcnu1O54982 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Kcnu1O54982 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.75□□□□□ -0.21
Kcnu1O54982 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.75□□□□□ -0.21
Kcnu1O54982 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Kcnu1O54982 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Kcnu1O54982 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Kcnu1O54982 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Kcnu1O54982 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Kcnu1O54982 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Kcnu1O54982 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Kcnu1O54982 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.75□□□□□ -0.21
Kcnu1O54982 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Kcnu1O54982 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Kcnu1O54982 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Kcnu1O54982 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Kcnu1O54982 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Kcnu1O54982 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Kcnu1O54982 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Kcnu1O54982 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Kcnu1O54982 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Kcnu1O54982 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Kcnu1O54982 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Kcnu1O54982 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Kcnu1O54982 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Kcnu1O54982 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Kcnu1O54982 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.74□□□□□ -0.21
Kcnu1O54982 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.74□□□□□ -0.21
Kcnu1O54982 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Kcnu1O54982 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms