Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sptlc1O35704 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sptlc1O35704 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sptlc1O35704 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sptlc1O35704 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sptlc1O35704 AC151904.4-201ENSMUST00000219868 1319 ntBASIC14.4□□□□□ -0.1
Sptlc1O35704 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sptlc1O35704 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.11
Sptlc1O35704 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sptlc1O35704 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Sptlc1O35704 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sptlc1O35704 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sptlc1O35704 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sptlc1O35704 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sptlc1O35704 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sptlc1O35704 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Sptlc1O35704 AC101945.2-201ENSMUST00000227886 1377 ntBASIC14.39□□□□□ -0.11
Sptlc1O35704 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Sptlc1O35704 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sptlc1O35704 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sptlc1O35704 Gm4986-201ENSMUST00000119731 549 ntBASIC14.39□□□□□ -0.11
Sptlc1O35704 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sptlc1O35704 Gm17208-201ENSMUST00000168388 535 ntBASIC14.39□□□□□ -0.11
Sptlc1O35704 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC14.39□□□□□ -0.11
Sptlc1O35704 Gm20854-202ENSMUST00000181549 1156 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Sptlc1O35704 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sptlc1O35704 Gm37489-201ENSMUST00000191883 159 ntBASIC14.39□□□□□ -0.11
Sptlc1O35704 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC14.39□□□□□ -0.11
Sptlc1O35704 Gm6458-201ENSMUST00000211573 635 ntBASIC14.39□□□□□ -0.11
Sptlc1O35704 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC14.39□□□□□ -0.11
Sptlc1O35704 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC14.39□□□□□ -0.11
Sptlc1O35704 AC135669.1-202ENSMUST00000216742 540 ntBASIC14.39□□□□□ -0.11
Sptlc1O35704 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sptlc1O35704 AC154441.1-201ENSMUST00000223653 1006 ntBASIC14.39□□□□□ -0.11
Sptlc1O35704 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sptlc1O35704 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Sptlc1O35704 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sptlc1O35704 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sptlc1O35704 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sptlc1O35704 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sptlc1O35704 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sptlc1O35704 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sptlc1O35704 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sptlc1O35704 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sptlc1O35704 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sptlc1O35704 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sptlc1O35704 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sptlc1O35704 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sptlc1O35704 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sptlc1O35704 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sptlc1O35704 Cd3e-201ENSMUST00000102832 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sptlc1O35704 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sptlc1O35704 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sptlc1O35704 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sptlc1O35704 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sptlc1O35704 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sptlc1O35704 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sptlc1O35704 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sptlc1O35704 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Sptlc1O35704 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sptlc1O35704 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC14.38□□□□□ -0.11
Sptlc1O35704 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC14.38□□□□□ -0.11
Sptlc1O35704 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sptlc1O35704 Gm26083-201ENSMUST00000157904 193 ntBASIC14.38□□□□□ -0.11
Sptlc1O35704 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC14.38□□□□□ -0.11
Sptlc1O35704 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC14.38□□□□□ -0.11
Sptlc1O35704 Gm19253-201ENSMUST00000204279 307 ntBASIC14.38□□□□□ -0.11
Sptlc1O35704 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sptlc1O35704 Gm5781-201ENSMUST00000219792 443 ntBASIC14.38□□□□□ -0.11
Sptlc1O35704 AC158388.1-201ENSMUST00000225441 256 ntBASIC14.38□□□□□ -0.11
Sptlc1O35704 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sptlc1O35704 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Sptlc1O35704 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sptlc1O35704 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Sptlc1O35704 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sptlc1O35704 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sptlc1O35704 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sptlc1O35704 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sptlc1O35704 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sptlc1O35704 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sptlc1O35704 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sptlc1O35704 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sptlc1O35704 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Sptlc1O35704 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Sptlc1O35704 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Sptlc1O35704 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sptlc1O35704 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sptlc1O35704 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sptlc1O35704 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Sptlc1O35704 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sptlc1O35704 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sptlc1O35704 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC14.37□□□□□ -0.11
Sptlc1O35704 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sptlc1O35704 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Sptlc1O35704 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Sptlc1O35704 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC14.37□□□□□ -0.11
Sptlc1O35704 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sptlc1O35704 Gm15808-201ENSMUST00000119046 604 ntBASIC14.37□□□□□ -0.11
Sptlc1O35704 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sptlc1O35704 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms