Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcf11G3X9Z4 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Pcf11G3X9Z4 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC19.26■□□□□ 0.67
Pcf11G3X9Z4 Mir219a-1-201ENSMUST00000083621 110 ntBASIC19.26■□□□□ 0.67
Pcf11G3X9Z4 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Pcf11G3X9Z4 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcf11G3X9Z4 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcf11G3X9Z4 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcf11G3X9Z4 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Pcf11G3X9Z4 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC19.25■□□□□ 0.67
Pcf11G3X9Z4 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Pcf11G3X9Z4 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcf11G3X9Z4 Gm14263-201ENSMUST00000117955 746 ntBASIC19.25■□□□□ 0.67
Pcf11G3X9Z4 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC19.25■□□□□ 0.67
Pcf11G3X9Z4 Mir1943-201ENSMUST00000158276 73 ntBASIC19.25■□□□□ 0.67
Pcf11G3X9Z4 Gm22902-201ENSMUST00000158488 302 ntBASIC19.25■□□□□ 0.67
Pcf11G3X9Z4 Gm20426-201ENSMUST00000173657 440 ntBASIC19.25■□□□□ 0.67
Pcf11G3X9Z4 Gm18304-201ENSMUST00000189162 546 ntBASIC19.25■□□□□ 0.67
Pcf11G3X9Z4 Gm44100-201ENSMUST00000204329 436 ntBASIC19.25■□□□□ 0.67
Pcf11G3X9Z4 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
Pcf11G3X9Z4 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcf11G3X9Z4 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcf11G3X9Z4 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Pcf11G3X9Z4 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcf11G3X9Z4 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcf11G3X9Z4 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcf11G3X9Z4 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC19.25■□□□□ 0.67
Pcf11G3X9Z4 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcf11G3X9Z4 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcf11G3X9Z4 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcf11G3X9Z4 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcf11G3X9Z4 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcf11G3X9Z4 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcf11G3X9Z4 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcf11G3X9Z4 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcf11G3X9Z4 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
Pcf11G3X9Z4 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcf11G3X9Z4 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcf11G3X9Z4 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcf11G3X9Z4 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Pcf11G3X9Z4 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC19.24■□□□□ 0.67
Pcf11G3X9Z4 Gm10051-201ENSMUST00000145209 414 ntBASIC19.24■□□□□ 0.67
Pcf11G3X9Z4 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC19.24■□□□□ 0.67
Pcf11G3X9Z4 Gm34767-201ENSMUST00000191813 1062 ntBASIC19.24■□□□□ 0.67
Pcf11G3X9Z4 Gm43378-201ENSMUST00000199336 582 ntBASIC19.24■□□□□ 0.67
Pcf11G3X9Z4 AC153954.1-201ENSMUST00000216959 255 ntBASIC19.24■□□□□ 0.67
Pcf11G3X9Z4 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcf11G3X9Z4 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Pcf11G3X9Z4 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcf11G3X9Z4 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Pcf11G3X9Z4 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcf11G3X9Z4 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcf11G3X9Z4 AC123619.2-202ENSMUST00000225097 1568 ntBASIC19.24■□□□□ 0.67
Pcf11G3X9Z4 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcf11G3X9Z4 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcf11G3X9Z4 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcf11G3X9Z4 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcf11G3X9Z4 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcf11G3X9Z4 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcf11G3X9Z4 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcf11G3X9Z4 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcf11G3X9Z4 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcf11G3X9Z4 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcf11G3X9Z4 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Pcf11G3X9Z4 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcf11G3X9Z4 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcf11G3X9Z4 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcf11G3X9Z4 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
Pcf11G3X9Z4 Gm6039-201ENSMUST00000121667 1250 ntBASIC19.23■□□□□ 0.67
Pcf11G3X9Z4 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Pcf11G3X9Z4 Gm29787-201ENSMUST00000222129 849 ntBASIC19.23■□□□□ 0.67
Pcf11G3X9Z4 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcf11G3X9Z4 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Pcf11G3X9Z4 Gm5525-201ENSMUST00000190438 1312 ntBASIC19.23■□□□□ 0.67
Pcf11G3X9Z4 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcf11G3X9Z4 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcf11G3X9Z4 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcf11G3X9Z4 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcf11G3X9Z4 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC19.23■□□□□ 0.67
Pcf11G3X9Z4 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcf11G3X9Z4 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcf11G3X9Z4 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcf11G3X9Z4 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Pcf11G3X9Z4 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcf11G3X9Z4 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC19.23■□□□□ 0.67
Pcf11G3X9Z4 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Pcf11G3X9Z4 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcf11G3X9Z4 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC19.23■□□□□ 0.67
Pcf11G3X9Z4 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcf11G3X9Z4 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcf11G3X9Z4 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcf11G3X9Z4 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC19.23■□□□□ 0.67
Pcf11G3X9Z4 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcf11G3X9Z4 Gm23699-201ENSMUST00000158835 135 ntBASIC19.23■□□□□ 0.67
Pcf11G3X9Z4 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcf11G3X9Z4 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC19.23■□□□□ 0.67
Pcf11G3X9Z4 Gm27627-201ENSMUST00000183644 150 ntBASIC19.23■□□□□ 0.67
Pcf11G3X9Z4 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC19.23■□□□□ 0.67
Pcf11G3X9Z4 Gm17827-201ENSMUST00000211825 742 ntBASIC19.23■□□□□ 0.67
Pcf11G3X9Z4 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms