Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.15□□□□□ -0.46
Colca2F8VPY8 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Colca2F8VPY8 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Colca2F8VPY8 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Colca2F8VPY8 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Colca2F8VPY8 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Colca2F8VPY8 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.15□□□□□ -0.46
Colca2F8VPY8 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.15□□□□□ -0.46
Colca2F8VPY8 Gm15703-201ENSMUST00000120250 880 ntBASIC12.15□□□□□ -0.46
Colca2F8VPY8 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.15□□□□□ -0.46
Colca2F8VPY8 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.15□□□□□ -0.46
Colca2F8VPY8 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC12.15□□□□□ -0.46
Colca2F8VPY8 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC12.15□□□□□ -0.46
Colca2F8VPY8 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC12.15□□□□□ -0.46
Colca2F8VPY8 Gm4482-201ENSMUST00000200876 742 ntBASIC12.15□□□□□ -0.46
Colca2F8VPY8 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Colca2F8VPY8 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.15□□□□□ -0.46
Colca2F8VPY8 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.15□□□□□ -0.46
Colca2F8VPY8 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.15□□□□□ -0.46
Colca2F8VPY8 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Colca2F8VPY8 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Colca2F8VPY8 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Colca2F8VPY8 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Colca2F8VPY8 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Colca2F8VPY8 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.15□□□□□ -0.46
Colca2F8VPY8 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Colca2F8VPY8 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Colca2F8VPY8 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Colca2F8VPY8 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Colca2F8VPY8 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Colca2F8VPY8 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Colca2F8VPY8 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.14□□□□□ -0.47
Colca2F8VPY8 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Colca2F8VPY8 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Colca2F8VPY8 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Colca2F8VPY8 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.14□□□□□ -0.47
Colca2F8VPY8 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.14□□□□□ -0.47
Colca2F8VPY8 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Colca2F8VPY8 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Colca2F8VPY8 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Colca2F8VPY8 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Colca2F8VPY8 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Colca2F8VPY8 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Colca2F8VPY8 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Colca2F8VPY8 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Colca2F8VPY8 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Colca2F8VPY8 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Colca2F8VPY8 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC12.14□□□□□ -0.47
Colca2F8VPY8 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Colca2F8VPY8 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Colca2F8VPY8 Gm5778-201ENSMUST00000171003 1072 ntBASIC12.14□□□□□ -0.47
Colca2F8VPY8 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.14□□□□□ -0.47
Colca2F8VPY8 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Colca2F8VPY8 Mir7677-201ENSMUST00000184226 67 ntBASIC12.14□□□□□ -0.47
Colca2F8VPY8 Mir6546-201ENSMUST00000184460 62 ntBASIC12.14□□□□□ -0.47
Colca2F8VPY8 Gm43962-201ENSMUST00000203898 190 ntBASIC12.14□□□□□ -0.47
Colca2F8VPY8 Gm17827-201ENSMUST00000211825 742 ntBASIC12.14□□□□□ -0.47
Colca2F8VPY8 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC12.14□□□□□ -0.47
Colca2F8VPY8 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Colca2F8VPY8 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC12.14□□□□□ -0.47
Colca2F8VPY8 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.14□□□□□ -0.47
Colca2F8VPY8 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Colca2F8VPY8 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Colca2F8VPY8 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Colca2F8VPY8 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Colca2F8VPY8 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.14□□□□□ -0.47
Colca2F8VPY8 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.14□□□□□ -0.47
Colca2F8VPY8 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Colca2F8VPY8 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Colca2F8VPY8 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Colca2F8VPY8 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.14□□□□□ -0.47
Colca2F8VPY8 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Colca2F8VPY8 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Colca2F8VPY8 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.14□□□□□ -0.47
Colca2F8VPY8 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Colca2F8VPY8 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Colca2F8VPY8 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Colca2F8VPY8 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.14□□□□□ -0.47
Colca2F8VPY8 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Colca2F8VPY8 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Colca2F8VPY8 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Colca2F8VPY8 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Colca2F8VPY8 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Colca2F8VPY8 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Colca2F8VPY8 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Colca2F8VPY8 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Colca2F8VPY8 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Colca2F8VPY8 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.13□□□□□ -0.47
Colca2F8VPY8 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.13□□□□□ -0.47
Colca2F8VPY8 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Colca2F8VPY8 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Colca2F8VPY8 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Colca2F8VPY8 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Colca2F8VPY8 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Colca2F8VPY8 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Colca2F8VPY8 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Colca2F8VPY8 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Colca2F8VPY8 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Colca2F8VPY8 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.13□□□□□ -0.47
Colca2F8VPY8 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms