Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.67□□□□□ -0.54
Pcdh1F7BJK1 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.67□□□□□ -0.54
Pcdh1F7BJK1 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Pcdh1F7BJK1 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.67□□□□□ -0.54
Pcdh1F7BJK1 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Pcdh1F7BJK1 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh1F7BJK1 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh1F7BJK1 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh1F7BJK1 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh1F7BJK1 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh1F7BJK1 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Pcdh1F7BJK1 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Pcdh1F7BJK1 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh1F7BJK1 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh1F7BJK1 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.67□□□□□ -0.54
Pcdh1F7BJK1 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.67□□□□□ -0.54
Pcdh1F7BJK1 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC11.67□□□□□ -0.54
Pcdh1F7BJK1 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh1F7BJK1 Gm9522-201ENSMUST00000182394 926 ntBASIC11.67□□□□□ -0.54
Pcdh1F7BJK1 Gm5279-201ENSMUST00000199575 745 ntBASIC11.67□□□□□ -0.54
Pcdh1F7BJK1 Gm44124-201ENSMUST00000204159 472 ntBASIC11.67□□□□□ -0.54
Pcdh1F7BJK1 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh1F7BJK1 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC11.67□□□□□ -0.54
Pcdh1F7BJK1 AC139580.1-202ENSMUST00000223574 928 ntBASIC11.67□□□□□ -0.54
Pcdh1F7BJK1 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh1F7BJK1 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh1F7BJK1 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC11.67□□□□□ -0.54
Pcdh1F7BJK1 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh1F7BJK1 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.67□□□□□ -0.54
Pcdh1F7BJK1 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh1F7BJK1 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh1F7BJK1 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh1F7BJK1 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh1F7BJK1 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh1F7BJK1 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh1F7BJK1 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh1F7BJK1 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh1F7BJK1 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh1F7BJK1 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh1F7BJK1 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.67□□□□□ -0.54
Pcdh1F7BJK1 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh1F7BJK1 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh1F7BJK1 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh1F7BJK1 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Pcdh1F7BJK1 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh1F7BJK1 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh1F7BJK1 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh1F7BJK1 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh1F7BJK1 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Pcdh1F7BJK1 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh1F7BJK1 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Pcdh1F7BJK1 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC11.66□□□□□ -0.54
Pcdh1F7BJK1 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh1F7BJK1 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.66□□□□□ -0.54
Pcdh1F7BJK1 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh1F7BJK1 Mir8102-201ENSMUST00000184148 139 ntBASIC11.66□□□□□ -0.54
Pcdh1F7BJK1 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh1F7BJK1 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.66□□□□□ -0.54
Pcdh1F7BJK1 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh1F7BJK1 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh1F7BJK1 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh1F7BJK1 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh1F7BJK1 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh1F7BJK1 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh1F7BJK1 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh1F7BJK1 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh1F7BJK1 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh1F7BJK1 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh1F7BJK1 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh1F7BJK1 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh1F7BJK1 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh1F7BJK1 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.66□□□□□ -0.54
Pcdh1F7BJK1 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
Pcdh1F7BJK1 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh1F7BJK1 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Pcdh1F7BJK1 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh1F7BJK1 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh1F7BJK1 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh1F7BJK1 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh1F7BJK1 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh1F7BJK1 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh1F7BJK1 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Pcdh1F7BJK1 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
Pcdh1F7BJK1 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.65□□□□□ -0.54
Pcdh1F7BJK1 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh1F7BJK1 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Pcdh1F7BJK1 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh1F7BJK1 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh1F7BJK1 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh1F7BJK1 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh1F7BJK1 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh1F7BJK1 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh1F7BJK1 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh1F7BJK1 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.65□□□□□ -0.54
Pcdh1F7BJK1 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh1F7BJK1 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh1F7BJK1 Gm11978-201ENSMUST00000122315 466 ntBASIC11.65□□□□□ -0.54
Pcdh1F7BJK1 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh1F7BJK1 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdh1F7BJK1 Mir7684-201ENSMUST00000183858 60 ntBASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms