Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Chd6A3KFM7 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Chd6A3KFM7 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Chd6A3KFM7 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC10.38□□□□□ -0.75
Chd6A3KFM7 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Chd6A3KFM7 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Chd6A3KFM7 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC10.38□□□□□ -0.75
Chd6A3KFM7 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC10.38□□□□□ -0.75
Chd6A3KFM7 Mir7677-201ENSMUST00000184226 67 ntBASIC10.38□□□□□ -0.75
Chd6A3KFM7 Gm18552-201ENSMUST00000187425 538 ntBASIC10.38□□□□□ -0.75
Chd6A3KFM7 Gm4930-201ENSMUST00000219926 1087 ntBASIC10.38□□□□□ -0.75
Chd6A3KFM7 AC102368.1-201ENSMUST00000227161 892 ntBASIC10.38□□□□□ -0.75
Chd6A3KFM7 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Chd6A3KFM7 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Chd6A3KFM7 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Chd6A3KFM7 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Chd6A3KFM7 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Chd6A3KFM7 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Chd6A3KFM7 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Chd6A3KFM7 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Chd6A3KFM7 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Chd6A3KFM7 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Chd6A3KFM7 Gm44056-201ENSMUST00000204623 1427 ntBASIC10.37□□□□□ -0.75
Chd6A3KFM7 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Chd6A3KFM7 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Chd6A3KFM7 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Chd6A3KFM7 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC10.37□□□□□ -0.75
Chd6A3KFM7 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Chd6A3KFM7 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Chd6A3KFM7 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Chd6A3KFM7 Mir8115-201ENSMUST00000184992 119 ntBASIC10.37□□□□□ -0.75
Chd6A3KFM7 Gm9230-201ENSMUST00000188228 532 ntBASIC10.37□□□□□ -0.75
Chd6A3KFM7 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
Chd6A3KFM7 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Chd6A3KFM7 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Chd6A3KFM7 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Chd6A3KFM7 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Chd6A3KFM7 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Chd6A3KFM7 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Chd6A3KFM7 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Chd6A3KFM7 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Chd6A3KFM7 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Chd6A3KFM7 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Chd6A3KFM7 Gm43598-201ENSMUST00000202482 2479 ntBASIC10.37□□□□□ -0.75
Chd6A3KFM7 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Chd6A3KFM7 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC10.37□□□□□ -0.75
Chd6A3KFM7 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Chd6A3KFM7 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Chd6A3KFM7 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Chd6A3KFM7 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC10.37□□□□□ -0.75
Chd6A3KFM7 AC129308.3-201ENSMUST00000225652 524 ntBASIC10.37□□□□□ -0.75
Chd6A3KFM7 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Chd6A3KFM7 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Chd6A3KFM7 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Chd6A3KFM7 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Chd6A3KFM7 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Chd6A3KFM7 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC10.37□□□□□ -0.75
Chd6A3KFM7 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Chd6A3KFM7 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Chd6A3KFM7 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Chd6A3KFM7 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Chd6A3KFM7 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Chd6A3KFM7 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Chd6A3KFM7 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Chd6A3KFM7 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC10.37□□□□□ -0.75
Chd6A3KFM7 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chd6A3KFM7 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Chd6A3KFM7 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chd6A3KFM7 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC10.36□□□□□ -0.75
Chd6A3KFM7 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC10.36□□□□□ -0.75
Chd6A3KFM7 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC10.36□□□□□ -0.75
Chd6A3KFM7 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
Chd6A3KFM7 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Chd6A3KFM7 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC10.36□□□□□ -0.75
Chd6A3KFM7 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Chd6A3KFM7 Gm6390-201ENSMUST00000215034 589 ntBASIC10.36□□□□□ -0.75
Chd6A3KFM7 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC10.36□□□□□ -0.75
Chd6A3KFM7 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chd6A3KFM7 AC136376.2-201ENSMUST00000228819 490 ntBASIC10.36□□□□□ -0.75
Chd6A3KFM7 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chd6A3KFM7 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Chd6A3KFM7 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Chd6A3KFM7 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC10.36□□□□□ -0.75
Chd6A3KFM7 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chd6A3KFM7 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Chd6A3KFM7 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chd6A3KFM7 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Chd6A3KFM7 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chd6A3KFM7 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Chd6A3KFM7 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Chd6A3KFM7 Gm6741-201ENSMUST00000057074 1330 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Chd6A3KFM7 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Chd6A3KFM7 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Chd6A3KFM7 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC10.36□□□□□ -0.75
Chd6A3KFM7 Blvra-202ENSMUST00000110389 657 ntTSL 3 BASIC10.36□□□□□ -0.75
Chd6A3KFM7 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC10.36□□□□□ -0.75
Chd6A3KFM7 Gm25226-201ENSMUST00000158198 123 ntBASIC10.36□□□□□ -0.75
Chd6A3KFM7 Gm21092-201ENSMUST00000178995 955 ntBASIC10.36□□□□□ -0.75
Chd6A3KFM7 Gm8824-201ENSMUST00000182962 990 ntBASIC10.36□□□□□ -0.75
Chd6A3KFM7 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms