Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn3aA2ASI5 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Scn3aA2ASI5 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC14.31□□□□□ -0.12
Scn3aA2ASI5 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn3aA2ASI5 Gm5638-201ENSMUST00000118618 1258 ntBASIC14.31□□□□□ -0.12
Scn3aA2ASI5 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC14.31□□□□□ -0.12
Scn3aA2ASI5 Gm8494-201ENSMUST00000178171 1233 ntBASIC14.31□□□□□ -0.12
Scn3aA2ASI5 Gm42937-201ENSMUST00000197360 752 ntBASIC14.31□□□□□ -0.12
Scn3aA2ASI5 Rprl1-202ENSMUST00000198476 238 ntBASIC14.31□□□□□ -0.12
Scn3aA2ASI5 Gm9678-201ENSMUST00000198979 1149 ntBASIC14.31□□□□□ -0.12
Scn3aA2ASI5 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn3aA2ASI5 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn3aA2ASI5 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn3aA2ASI5 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.31□□□□□ -0.12
Scn3aA2ASI5 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn3aA2ASI5 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn3aA2ASI5 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn3aA2ASI5 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC14.31□□□□□ -0.12
Scn3aA2ASI5 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn3aA2ASI5 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn3aA2ASI5 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn3aA2ASI5 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn3aA2ASI5 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn3aA2ASI5 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC14.31□□□□□ -0.12
Scn3aA2ASI5 Gm12217-201ENSMUST00000118858 696 ntBASIC14.31□□□□□ -0.12
Scn3aA2ASI5 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Scn3aA2ASI5 Gm14277-201ENSMUST00000121195 360 ntBASIC14.31□□□□□ -0.12
Scn3aA2ASI5 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn3aA2ASI5 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Scn3aA2ASI5 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC14.31□□□□□ -0.12
Scn3aA2ASI5 AC154305.4-201ENSMUST00000224520 614 ntBASIC14.31□□□□□ -0.12
Scn3aA2ASI5 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Scn3aA2ASI5 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn3aA2ASI5 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn3aA2ASI5 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn3aA2ASI5 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn3aA2ASI5 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Scn3aA2ASI5 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Scn3aA2ASI5 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn3aA2ASI5 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn3aA2ASI5 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn3aA2ASI5 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn3aA2ASI5 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn3aA2ASI5 Gm43858-201ENSMUST00000199418 1778 ntBASIC14.3□□□□□ -0.12
Scn3aA2ASI5 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Scn3aA2ASI5 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn3aA2ASI5 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn3aA2ASI5 Gm7857-201ENSMUST00000117957 358 ntBASIC14.3□□□□□ -0.12
Scn3aA2ASI5 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Scn3aA2ASI5 Gm43068-201ENSMUST00000201095 1273 ntBASIC14.3□□□□□ -0.12
Scn3aA2ASI5 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn3aA2ASI5 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.3□□□□□ -0.12
Scn3aA2ASI5 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn3aA2ASI5 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn3aA2ASI5 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Scn3aA2ASI5 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC14.3□□□□□ -0.12
Scn3aA2ASI5 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Scn3aA2ASI5 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Scn3aA2ASI5 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Scn3aA2ASI5 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Scn3aA2ASI5 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn3aA2ASI5 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Scn3aA2ASI5 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn3aA2ASI5 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn3aA2ASI5 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Scn3aA2ASI5 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Scn3aA2ASI5 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Scn3aA2ASI5 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn3aA2ASI5 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC14.3□□□□□ -0.12
Scn3aA2ASI5 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Scn3aA2ASI5 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn3aA2ASI5 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn3aA2ASI5 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn3aA2ASI5 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Scn3aA2ASI5 Gm23200-201ENSMUST00000104379 132 ntBASIC14.29□□□□□ -0.12
Scn3aA2ASI5 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC14.29□□□□□ -0.12
Scn3aA2ASI5 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC14.29□□□□□ -0.12
Scn3aA2ASI5 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn3aA2ASI5 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
Scn3aA2ASI5 Gm16505-201ENSMUST00000179981 232 ntBASIC14.29□□□□□ -0.12
Scn3aA2ASI5 Gm8913-201ENSMUST00000209491 641 ntBASIC14.29□□□□□ -0.12
Scn3aA2ASI5 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC14.29□□□□□ -0.12
Scn3aA2ASI5 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Scn3aA2ASI5 Gzmn-202ENSMUST00000225535 989 ntBASIC14.29□□□□□ -0.12
Scn3aA2ASI5 AC093022.5-201ENSMUST00000226841 1079 ntBASIC14.29□□□□□ -0.12
Scn3aA2ASI5 Gm10076-201ENSMUST00000073238 384 ntBASIC14.29□□□□□ -0.12
Scn3aA2ASI5 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Scn3aA2ASI5 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn3aA2ASI5 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn3aA2ASI5 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Scn3aA2ASI5 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Scn3aA2ASI5 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn3aA2ASI5 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn3aA2ASI5 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn3aA2ASI5 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Scn3aA2ASI5 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn3aA2ASI5 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn3aA2ASI5 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn3aA2ASI5 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Scn3aA2ASI5 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms