Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
NEUROD4Q9HD90 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NEUROD4Q9HD90 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NEUROD4Q9HD90 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NEUROD4Q9HD90 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NEUROD4Q9HD90 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NEUROD4Q9HD90 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NEUROD4Q9HD90 AC142381.1-201ENST00000426099 345 ntBASIC15.16■□□□□ 0.02
NEUROD4Q9HD90 ADH5P3-201ENST00000433842 1137 ntBASIC15.16■□□□□ 0.02
NEUROD4Q9HD90 ACTG1P14-201ENST00000446382 1122 ntBASIC15.16■□□□□ 0.02
NEUROD4Q9HD90 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.16■□□□□ 0.02
NEUROD4Q9HD90 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.16■□□□□ 0.02
NEUROD4Q9HD90 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.16■□□□□ 0.02
NEUROD4Q9HD90 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.16■□□□□ 0.02
NEUROD4Q9HD90 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.16■□□□□ 0.02
NEUROD4Q9HD90 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.16■□□□□ 0.02
NEUROD4Q9HD90 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.16■□□□□ 0.02
NEUROD4Q9HD90 AL596442.2-201ENST00000610240 980 ntBASIC15.16■□□□□ 0.02
NEUROD4Q9HD90 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NEUROD4Q9HD90 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NEUROD4Q9HD90 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
NEUROD4Q9HD90 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NEUROD4Q9HD90 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NEUROD4Q9HD90 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NEUROD4Q9HD90 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.16■□□□□ 0.02
NEUROD4Q9HD90 AC134407.2-201ENST00000625089 1978 ntBASIC15.16■□□□□ 0.02
NEUROD4Q9HD90 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NEUROD4Q9HD90 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.16■□□□□ 0.02
NEUROD4Q9HD90 AC126755.1-201ENST00000525846 6405 ntBASIC15.16■□□□□ 0.02
NEUROD4Q9HD90 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
NEUROD4Q9HD90 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NEUROD4Q9HD90 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NEUROD4Q9HD90 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NEUROD4Q9HD90 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NEUROD4Q9HD90 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.16■□□□□ 0.02
NEUROD4Q9HD90 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
NEUROD4Q9HD90 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NEUROD4Q9HD90 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.15■□□□□ 0.02
NEUROD4Q9HD90 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.15■□□□□ 0.02
NEUROD4Q9HD90 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.15■□□□□ 0.02
NEUROD4Q9HD90 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NEUROD4Q9HD90 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.15■□□□□ 0.02
NEUROD4Q9HD90 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NEUROD4Q9HD90 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NEUROD4Q9HD90 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NEUROD4Q9HD90 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.15■□□□□ 0.02
NEUROD4Q9HD90 AC022532.1-201ENST00000624563 1728 ntBASIC15.15■□□□□ 0.02
NEUROD4Q9HD90 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NEUROD4Q9HD90 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NEUROD4Q9HD90 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NEUROD4Q9HD90 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NEUROD4Q9HD90 AP006288.1-201ENST00000446065 395 ntBASIC15.15■□□□□ 0.02
NEUROD4Q9HD90 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
NEUROD4Q9HD90 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.15■□□□□ 0.02
NEUROD4Q9HD90 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.15■□□□□ 0.02
NEUROD4Q9HD90 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NEUROD4Q9HD90 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
NEUROD4Q9HD90 AC104640.1-201ENST00000562617 2109 ntBASIC15.15■□□□□ 0.02
NEUROD4Q9HD90 AL138918.1-201ENST00000568306 659 ntBASIC15.15■□□□□ 0.02
NEUROD4Q9HD90 AC005829.1-201ENST00000570002 483 ntBASIC15.15■□□□□ 0.02
NEUROD4Q9HD90 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.15■□□□□ 0.02
NEUROD4Q9HD90 AC027307.2-201ENST00000591252 911 ntBASIC15.15■□□□□ 0.02
NEUROD4Q9HD90 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.15■□□□□ 0.02
NEUROD4Q9HD90 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC15.15■□□□□ 0.02
NEUROD4Q9HD90 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NEUROD4Q9HD90 AC092384.3-202ENST00000564646 2873 ntBASIC15.15■□□□□ 0.02
NEUROD4Q9HD90 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NEUROD4Q9HD90 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.15■□□□□ 0.02
NEUROD4Q9HD90 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.15■□□□□ 0.02
NEUROD4Q9HD90 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NEUROD4Q9HD90 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
NEUROD4Q9HD90 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.15■□□□□ 0.02
NEUROD4Q9HD90 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NEUROD4Q9HD90 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NEUROD4Q9HD90 KC6-207ENST00000600644 2311 ntTSL 3 BASIC15.15■□□□□ 0.02
NEUROD4Q9HD90 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NEUROD4Q9HD90 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NEUROD4Q9HD90 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NEUROD4Q9HD90 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
NEUROD4Q9HD90 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NEUROD4Q9HD90 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.15■□□□□ 0.02
NEUROD4Q9HD90 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
NEUROD4Q9HD90 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.14■□□□□ 0.01
NEUROD4Q9HD90 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.14■□□□□ 0.01
NEUROD4Q9HD90 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.14■□□□□ 0.01
NEUROD4Q9HD90 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.14■□□□□ 0.01
NEUROD4Q9HD90 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NEUROD4Q9HD90 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NEUROD4Q9HD90 FOXO1B-201ENST00000504678 1527 ntBASIC15.14■□□□□ 0.01
NEUROD4Q9HD90 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NEUROD4Q9HD90 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
NEUROD4Q9HD90 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
NEUROD4Q9HD90 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
NEUROD4Q9HD90 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NEUROD4Q9HD90 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.14■□□□□ 0.01
NEUROD4Q9HD90 FAM220BP-201ENST00000377689 816 ntBASIC15.14■□□□□ 0.01
NEUROD4Q9HD90 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
NEUROD4Q9HD90 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.14■□□□□ 0.01
NEUROD4Q9HD90 MCCD1P2-201ENST00000423228 335 ntBASIC15.14■□□□□ 0.01
NEUROD4Q9HD90 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms