Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm26315-201ENSMUST00000083890 321 ntBASIC12.08□□□□□ -0.48
Cdc40Q9DC48 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdc40Q9DC48 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdc40Q9DC48 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdc40Q9DC48 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdc40Q9DC48 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdc40Q9DC48 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdc40Q9DC48 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdc40Q9DC48 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdc40Q9DC48 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdc40Q9DC48 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cdc40Q9DC48 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdc40Q9DC48 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdc40Q9DC48 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdc40Q9DC48 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdc40Q9DC48 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdc40Q9DC48 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdc40Q9DC48 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdc40Q9DC48 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdc40Q9DC48 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdc40Q9DC48 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdc40Q9DC48 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdc40Q9DC48 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdc40Q9DC48 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdc40Q9DC48 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdc40Q9DC48 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdc40Q9DC48 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.07□□□□□ -0.48
Cdc40Q9DC48 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdc40Q9DC48 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdc40Q9DC48 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdc40Q9DC48 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Cdc40Q9DC48 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.07□□□□□ -0.48
Cdc40Q9DC48 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.07□□□□□ -0.48
Cdc40Q9DC48 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdc40Q9DC48 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.07□□□□□ -0.48
Cdc40Q9DC48 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.07□□□□□ -0.48
Cdc40Q9DC48 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Cdc40Q9DC48 Gm45331-201ENSMUST00000209868 554 ntBASIC12.07□□□□□ -0.48
Cdc40Q9DC48 Gm8598-201ENSMUST00000221184 836 ntBASIC12.07□□□□□ -0.48
Cdc40Q9DC48 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Cdc40Q9DC48 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdc40Q9DC48 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdc40Q9DC48 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Cdc40Q9DC48 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdc40Q9DC48 Olfr582-201ENSMUST00000098212 960 ntBASIC12.07□□□□□ -0.48
Cdc40Q9DC48 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
Cdc40Q9DC48 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.07□□□□□ -0.48
Cdc40Q9DC48 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.07□□□□□ -0.48
Cdc40Q9DC48 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdc40Q9DC48 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdc40Q9DC48 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdc40Q9DC48 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdc40Q9DC48 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdc40Q9DC48 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdc40Q9DC48 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Cdc40Q9DC48 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdc40Q9DC48 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Cdc40Q9DC48 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdc40Q9DC48 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdc40Q9DC48 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdc40Q9DC48 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdc40Q9DC48 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdc40Q9DC48 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.06□□□□□ -0.48
Cdc40Q9DC48 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdc40Q9DC48 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdc40Q9DC48 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdc40Q9DC48 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdc40Q9DC48 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdc40Q9DC48 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Cdc40Q9DC48 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdc40Q9DC48 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Cdc40Q9DC48 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.06□□□□□ -0.48
Cdc40Q9DC48 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdc40Q9DC48 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Cdc40Q9DC48 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Cdc40Q9DC48 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdc40Q9DC48 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdc40Q9DC48 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdc40Q9DC48 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdc40Q9DC48 Gm12384-201ENSMUST00000119228 919 ntBASIC12.06□□□□□ -0.48
Cdc40Q9DC48 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.06□□□□□ -0.48
Cdc40Q9DC48 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdc40Q9DC48 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.06□□□□□ -0.48
Cdc40Q9DC48 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.06□□□□□ -0.48
Cdc40Q9DC48 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdc40Q9DC48 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdc40Q9DC48 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdc40Q9DC48 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdc40Q9DC48 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdc40Q9DC48 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdc40Q9DC48 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdc40Q9DC48 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.06□□□□□ -0.48
Cdc40Q9DC48 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdc40Q9DC48 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.06□□□□□ -0.48
Cdc40Q9DC48 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Cdc40Q9DC48 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Cdc40Q9DC48 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdc40Q9DC48 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdc40Q9DC48 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdc40Q9DC48 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms