Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cldnd1Q9CQX5 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.21□□□□□ -0.29
Cldnd1Q9CQX5 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.21□□□□□ -0.29
Cldnd1Q9CQX5 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cldnd1Q9CQX5 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cldnd1Q9CQX5 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Cldnd1Q9CQX5 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cldnd1Q9CQX5 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cldnd1Q9CQX5 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cldnd1Q9CQX5 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cldnd1Q9CQX5 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cldnd1Q9CQX5 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cldnd1Q9CQX5 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cldnd1Q9CQX5 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.21□□□□□ -0.29
Cldnd1Q9CQX5 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cldnd1Q9CQX5 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.21□□□□□ -0.29
Cldnd1Q9CQX5 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.21□□□□□ -0.29
Cldnd1Q9CQX5 Gm4993-201ENSMUST00000118719 1174 ntBASIC13.21□□□□□ -0.29
Cldnd1Q9CQX5 Gm15432-201ENSMUST00000121106 195 ntBASIC13.21□□□□□ -0.29
Cldnd1Q9CQX5 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cldnd1Q9CQX5 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cldnd1Q9CQX5 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.21□□□□□ -0.29
Cldnd1Q9CQX5 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.21□□□□□ -0.29
Cldnd1Q9CQX5 Gm8018-201ENSMUST00000173536 789 ntBASIC13.21□□□□□ -0.29
Cldnd1Q9CQX5 Gm27627-201ENSMUST00000183644 150 ntBASIC13.21□□□□□ -0.29
Cldnd1Q9CQX5 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC13.21□□□□□ -0.29
Cldnd1Q9CQX5 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC13.21□□□□□ -0.29
Cldnd1Q9CQX5 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC13.21□□□□□ -0.29
Cldnd1Q9CQX5 Gm43058-201ENSMUST00000197645 625 ntBASIC13.21□□□□□ -0.29
Cldnd1Q9CQX5 Gm45598-202ENSMUST00000210719 986 ntBASIC13.21□□□□□ -0.29
Cldnd1Q9CQX5 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC13.21□□□□□ -0.29
Cldnd1Q9CQX5 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cldnd1Q9CQX5 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cldnd1Q9CQX5 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Cldnd1Q9CQX5 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Cldnd1Q9CQX5 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Cldnd1Q9CQX5 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Cldnd1Q9CQX5 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cldnd1Q9CQX5 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cldnd1Q9CQX5 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cldnd1Q9CQX5 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
Cldnd1Q9CQX5 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cldnd1Q9CQX5 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
Cldnd1Q9CQX5 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Cldnd1Q9CQX5 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cldnd1Q9CQX5 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cldnd1Q9CQX5 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.21□□□□□ -0.3
Cldnd1Q9CQX5 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cldnd1Q9CQX5 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Cldnd1Q9CQX5 AC122197.2-201ENSMUST00000219196 1635 ntBASIC13.21□□□□□ -0.3
Cldnd1Q9CQX5 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cldnd1Q9CQX5 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Cldnd1Q9CQX5 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cldnd1Q9CQX5 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cldnd1Q9CQX5 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cldnd1Q9CQX5 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Cldnd1Q9CQX5 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cldnd1Q9CQX5 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cldnd1Q9CQX5 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Cldnd1Q9CQX5 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cldnd1Q9CQX5 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cldnd1Q9CQX5 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cldnd1Q9CQX5 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.2□□□□□ -0.3
Cldnd1Q9CQX5 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cldnd1Q9CQX5 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cldnd1Q9CQX5 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cldnd1Q9CQX5 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.2□□□□□ -0.3
Cldnd1Q9CQX5 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cldnd1Q9CQX5 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cldnd1Q9CQX5 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Cldnd1Q9CQX5 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC13.2□□□□□ -0.3
Cldnd1Q9CQX5 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.2□□□□□ -0.3
Cldnd1Q9CQX5 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC13.2□□□□□ -0.3
Cldnd1Q9CQX5 Gm44551-201ENSMUST00000208804 171 ntBASIC13.2□□□□□ -0.3
Cldnd1Q9CQX5 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC13.2□□□□□ -0.3
Cldnd1Q9CQX5 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC13.2□□□□□ -0.3
Cldnd1Q9CQX5 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cldnd1Q9CQX5 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Cldnd1Q9CQX5 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cldnd1Q9CQX5 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Cldnd1Q9CQX5 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cldnd1Q9CQX5 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cldnd1Q9CQX5 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC13.2□□□□□ -0.3
Cldnd1Q9CQX5 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cldnd1Q9CQX5 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cldnd1Q9CQX5 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cldnd1Q9CQX5 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cldnd1Q9CQX5 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cldnd1Q9CQX5 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cldnd1Q9CQX5 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cldnd1Q9CQX5 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cldnd1Q9CQX5 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cldnd1Q9CQX5 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.19□□□□□ -0.3
Cldnd1Q9CQX5 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cldnd1Q9CQX5 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cldnd1Q9CQX5 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cldnd1Q9CQX5 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cldnd1Q9CQX5 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cldnd1Q9CQX5 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC13.19□□□□□ -0.3
Cldnd1Q9CQX5 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms