Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.18□□□□□ -0.46
Nkx6-1Q99MA9 Gm44405-201ENSMUST00000198952 126 ntBASIC12.18□□□□□ -0.46
Nkx6-1Q99MA9 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.18□□□□□ -0.46
Nkx6-1Q99MA9 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.18□□□□□ -0.46
Nkx6-1Q99MA9 AC153961.1-201ENSMUST00000217760 385 ntBASIC12.18□□□□□ -0.46
Nkx6-1Q99MA9 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx6-1Q99MA9 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.18□□□□□ -0.46
Nkx6-1Q99MA9 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.18□□□□□ -0.46
Nkx6-1Q99MA9 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx6-1Q99MA9 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx6-1Q99MA9 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx6-1Q99MA9 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx6-1Q99MA9 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.18□□□□□ -0.46
Nkx6-1Q99MA9 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Nkx6-1Q99MA9 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.18□□□□□ -0.46
Nkx6-1Q99MA9 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx6-1Q99MA9 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx6-1Q99MA9 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx6-1Q99MA9 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Nkx6-1Q99MA9 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Nkx6-1Q99MA9 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx6-1Q99MA9 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Nkx6-1Q99MA9 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx6-1Q99MA9 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Nkx6-1Q99MA9 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.18□□□□□ -0.46
Nkx6-1Q99MA9 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx6-1Q99MA9 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-1Q99MA9 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Nkx6-1Q99MA9 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-1Q99MA9 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-1Q99MA9 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-1Q99MA9 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.17□□□□□ -0.46
Nkx6-1Q99MA9 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-1Q99MA9 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-1Q99MA9 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-1Q99MA9 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-1Q99MA9 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-1Q99MA9 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-1Q99MA9 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.17□□□□□ -0.46
Nkx6-1Q99MA9 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Nkx6-1Q99MA9 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-1Q99MA9 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-1Q99MA9 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.17□□□□□ -0.46
Nkx6-1Q99MA9 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Nkx6-1Q99MA9 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-1Q99MA9 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Nkx6-1Q99MA9 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Nkx6-1Q99MA9 Gm13611-201ENSMUST00000118269 318 ntBASIC12.17□□□□□ -0.46
Nkx6-1Q99MA9 Gm11978-201ENSMUST00000122315 466 ntBASIC12.17□□□□□ -0.46
Nkx6-1Q99MA9 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Nkx6-1Q99MA9 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.17□□□□□ -0.46
Nkx6-1Q99MA9 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC12.17□□□□□ -0.46
Nkx6-1Q99MA9 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.17□□□□□ -0.46
Nkx6-1Q99MA9 Gm8885-201ENSMUST00000189382 598 ntBASIC12.17□□□□□ -0.46
Nkx6-1Q99MA9 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.17□□□□□ -0.46
Nkx6-1Q99MA9 AC141438.2-201ENSMUST00000215068 271 ntBASIC12.17□□□□□ -0.46
Nkx6-1Q99MA9 AC135114.1-201ENSMUST00000228682 270 ntBASIC12.17□□□□□ -0.46
Nkx6-1Q99MA9 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Nkx6-1Q99MA9 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-1Q99MA9 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.17□□□□□ -0.46
Nkx6-1Q99MA9 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-1Q99MA9 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-1Q99MA9 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Nkx6-1Q99MA9 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-1Q99MA9 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-1Q99MA9 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-1Q99MA9 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-1Q99MA9 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-1Q99MA9 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-1Q99MA9 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Nkx6-1Q99MA9 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-1Q99MA9 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Nkx6-1Q99MA9 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-1Q99MA9 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-1Q99MA9 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-1Q99MA9 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx6-1Q99MA9 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-1Q99MA9 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-1Q99MA9 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Nkx6-1Q99MA9 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-1Q99MA9 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-1Q99MA9 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-1Q99MA9 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-1Q99MA9 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-1Q99MA9 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Nkx6-1Q99MA9 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-1Q99MA9 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.16□□□□□ -0.46
Nkx6-1Q99MA9 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.16□□□□□ -0.46
Nkx6-1Q99MA9 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-1Q99MA9 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Nkx6-1Q99MA9 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Nkx6-1Q99MA9 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.16□□□□□ -0.46
Nkx6-1Q99MA9 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-1Q99MA9 Snord83b-201ENSMUST00000104546 94 ntBASIC12.16□□□□□ -0.46
Nkx6-1Q99MA9 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.16□□□□□ -0.46
Nkx6-1Q99MA9 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC12.16□□□□□ -0.46
Nkx6-1Q99MA9 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.16□□□□□ -0.46
Nkx6-1Q99MA9 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC12.16□□□□□ -0.46
Nkx6-1Q99MA9 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx6-1Q99MA9 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms