Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb3Q91XZ7 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb3Q91XZ7 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb3Q91XZ7 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Pcdhb3Q91XZ7 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Pcdhb3Q91XZ7 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Pcdhb3Q91XZ7 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.11□□□□□ -0.31
Pcdhb3Q91XZ7 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb3Q91XZ7 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.11□□□□□ -0.31
Pcdhb3Q91XZ7 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb3Q91XZ7 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb3Q91XZ7 Gm5708-201ENSMUST00000196289 886 ntBASIC13.11□□□□□ -0.31
Pcdhb3Q91XZ7 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb3Q91XZ7 Gm43553-201ENSMUST00000200900 685 ntBASIC13.11□□□□□ -0.31
Pcdhb3Q91XZ7 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.11□□□□□ -0.31
Pcdhb3Q91XZ7 Gm34272-201ENSMUST00000208886 253 ntBASIC13.11□□□□□ -0.31
Pcdhb3Q91XZ7 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.11□□□□□ -0.31
Pcdhb3Q91XZ7 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb3Q91XZ7 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.11□□□□□ -0.31
Pcdhb3Q91XZ7 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb3Q91XZ7 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.11□□□□□ -0.31
Pcdhb3Q91XZ7 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb3Q91XZ7 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Pcdhb3Q91XZ7 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Pcdhb3Q91XZ7 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb3Q91XZ7 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb3Q91XZ7 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb3Q91XZ7 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Pcdhb3Q91XZ7 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb3Q91XZ7 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb3Q91XZ7 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb3Q91XZ7 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Pcdhb3Q91XZ7 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb3Q91XZ7 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb3Q91XZ7 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb3Q91XZ7 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb3Q91XZ7 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb3Q91XZ7 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb3Q91XZ7 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb3Q91XZ7 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb3Q91XZ7 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC13.1□□□□□ -0.31
Pcdhb3Q91XZ7 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb3Q91XZ7 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb3Q91XZ7 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdhb3Q91XZ7 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb3Q91XZ7 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb3Q91XZ7 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb3Q91XZ7 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Pcdhb3Q91XZ7 Gm14719-201ENSMUST00000121891 340 ntBASIC13.1□□□□□ -0.31
Pcdhb3Q91XZ7 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb3Q91XZ7 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.1□□□□□ -0.31
Pcdhb3Q91XZ7 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.1□□□□□ -0.31
Pcdhb3Q91XZ7 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Pcdhb3Q91XZ7 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Pcdhb3Q91XZ7 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb3Q91XZ7 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb3Q91XZ7 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.1□□□□□ -0.31
Pcdhb3Q91XZ7 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb3Q91XZ7 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.1□□□□□ -0.31
Pcdhb3Q91XZ7 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Pcdhb3Q91XZ7 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Pcdhb3Q91XZ7 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb3Q91XZ7 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Pcdhb3Q91XZ7 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb3Q91XZ7 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb3Q91XZ7 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb3Q91XZ7 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb3Q91XZ7 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb3Q91XZ7 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb3Q91XZ7 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb3Q91XZ7 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Pcdhb3Q91XZ7 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC13.1□□□□□ -0.31
Pcdhb3Q91XZ7 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb3Q91XZ7 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb3Q91XZ7 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb3Q91XZ7 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdhb3Q91XZ7 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Pcdhb3Q91XZ7 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb3Q91XZ7 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb3Q91XZ7 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb3Q91XZ7 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdhb3Q91XZ7 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb3Q91XZ7 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Pcdhb3Q91XZ7 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb3Q91XZ7 BC001981-202ENSMUST00000191393 1545 ntBASIC13.09□□□□□ -0.31
Pcdhb3Q91XZ7 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
Pcdhb3Q91XZ7 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb3Q91XZ7 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb3Q91XZ7 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb3Q91XZ7 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdhb3Q91XZ7 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb3Q91XZ7 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb3Q91XZ7 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb3Q91XZ7 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb3Q91XZ7 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb3Q91XZ7 Gm27838-201ENSMUST00000184829 128 ntBASIC13.09□□□□□ -0.31
Pcdhb3Q91XZ7 Gm20239-201ENSMUST00000196610 982 ntBASIC13.09□□□□□ -0.31
Pcdhb3Q91XZ7 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb3Q91XZ7 Dupd1-202ENSMUST00000224735 548 ntBASIC13.09□□□□□ -0.31
Pcdhb3Q91XZ7 Shd-206ENSMUST00000225145 998 ntBASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms