Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.32□□□□□ -0.28
Pcdhb6Q91XZ4 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Pcdhb6Q91XZ4 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb6Q91XZ4 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.32□□□□□ -0.28
Pcdhb6Q91XZ4 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.32□□□□□ -0.28
Pcdhb6Q91XZ4 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.32□□□□□ -0.28
Pcdhb6Q91XZ4 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.32□□□□□ -0.28
Pcdhb6Q91XZ4 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb6Q91XZ4 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb6Q91XZ4 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb6Q91XZ4 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb6Q91XZ4 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb6Q91XZ4 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.32□□□□□ -0.28
Pcdhb6Q91XZ4 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb6Q91XZ4 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb6Q91XZ4 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb6Q91XZ4 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb6Q91XZ4 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.32□□□□□ -0.28
Pcdhb6Q91XZ4 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.32□□□□□ -0.28
Pcdhb6Q91XZ4 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.32□□□□□ -0.28
Pcdhb6Q91XZ4 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb6Q91XZ4 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.32□□□□□ -0.28
Pcdhb6Q91XZ4 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.32□□□□□ -0.28
Pcdhb6Q91XZ4 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Pcdhb6Q91XZ4 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb6Q91XZ4 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb6Q91XZ4 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Pcdhb6Q91XZ4 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Pcdhb6Q91XZ4 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb6Q91XZ4 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Pcdhb6Q91XZ4 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb6Q91XZ4 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Pcdhb6Q91XZ4 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.32□□□□□ -0.28
Pcdhb6Q91XZ4 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb6Q91XZ4 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb6Q91XZ4 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb6Q91XZ4 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pcdhb6Q91XZ4 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Pcdhb6Q91XZ4 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.32□□□□□ -0.28
Pcdhb6Q91XZ4 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Pcdhb6Q91XZ4 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb6Q91XZ4 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Pcdhb6Q91XZ4 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Pcdhb6Q91XZ4 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb6Q91XZ4 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb6Q91XZ4 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.31□□□□□ -0.28
Pcdhb6Q91XZ4 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb6Q91XZ4 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Pcdhb6Q91XZ4 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb6Q91XZ4 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.31□□□□□ -0.28
Pcdhb6Q91XZ4 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb6Q91XZ4 Gm24644-201ENSMUST00000157114 139 ntBASIC13.31□□□□□ -0.28
Pcdhb6Q91XZ4 Gm22121-201ENSMUST00000175148 54 ntBASIC13.31□□□□□ -0.28
Pcdhb6Q91XZ4 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.31□□□□□ -0.28
Pcdhb6Q91XZ4 Gm27847-201ENSMUST00000183711 107 ntBASIC13.31□□□□□ -0.28
Pcdhb6Q91XZ4 Gm27375-201ENSMUST00000183799 107 ntBASIC13.31□□□□□ -0.28
Pcdhb6Q91XZ4 Gm37042-201ENSMUST00000193816 581 ntBASIC13.31□□□□□ -0.28
Pcdhb6Q91XZ4 Gm29705-201ENSMUST00000212598 474 ntBASIC13.31□□□□□ -0.28
Pcdhb6Q91XZ4 Gm10146-201ENSMUST00000072739 309 ntBASIC13.31□□□□□ -0.28
Pcdhb6Q91XZ4 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Pcdhb6Q91XZ4 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.31□□□□□ -0.28
Pcdhb6Q91XZ4 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb6Q91XZ4 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb6Q91XZ4 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.31□□□□□ -0.28
Pcdhb6Q91XZ4 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb6Q91XZ4 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.31□□□□□ -0.28
Pcdhb6Q91XZ4 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.31□□□□□ -0.28
Pcdhb6Q91XZ4 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb6Q91XZ4 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb6Q91XZ4 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb6Q91XZ4 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Pcdhb6Q91XZ4 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.31□□□□□ -0.28
Pcdhb6Q91XZ4 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb6Q91XZ4 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb6Q91XZ4 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb6Q91XZ4 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Pcdhb6Q91XZ4 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdhb6Q91XZ4 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb6Q91XZ4 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Pcdhb6Q91XZ4 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb6Q91XZ4 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb6Q91XZ4 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb6Q91XZ4 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb6Q91XZ4 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Pcdhb6Q91XZ4 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb6Q91XZ4 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb6Q91XZ4 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Pcdhb6Q91XZ4 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb6Q91XZ4 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb6Q91XZ4 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb6Q91XZ4 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb6Q91XZ4 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Pcdhb6Q91XZ4 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb6Q91XZ4 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Pcdhb6Q91XZ4 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb6Q91XZ4 Snord83b-201ENSMUST00000104546 94 ntBASIC13.3□□□□□ -0.28
Pcdhb6Q91XZ4 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.3□□□□□ -0.28
Pcdhb6Q91XZ4 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.3□□□□□ -0.28
Pcdhb6Q91XZ4 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb6Q91XZ4 Gm4271-201ENSMUST00000174444 973 ntBASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms