Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga6Q91XY2 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga6Q91XY2 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga6Q91XY2 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhga6Q91XY2 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.96□□□□□ -0.33
Pcdhga6Q91XY2 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga6Q91XY2 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga6Q91XY2 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.96□□□□□ -0.33
Pcdhga6Q91XY2 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.96□□□□□ -0.33
Pcdhga6Q91XY2 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga6Q91XY2 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga6Q91XY2 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Pcdhga6Q91XY2 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga6Q91XY2 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.96□□□□□ -0.33
Pcdhga6Q91XY2 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga6Q91XY2 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.96□□□□□ -0.33
Pcdhga6Q91XY2 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga6Q91XY2 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.96□□□□□ -0.33
Pcdhga6Q91XY2 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.96□□□□□ -0.33
Pcdhga6Q91XY2 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.96□□□□□ -0.33
Pcdhga6Q91XY2 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.96□□□□□ -0.33
Pcdhga6Q91XY2 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.96□□□□□ -0.33
Pcdhga6Q91XY2 Gm2231-201ENSMUST00000125661 612 ntBASIC12.96□□□□□ -0.33
Pcdhga6Q91XY2 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga6Q91XY2 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga6Q91XY2 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga6Q91XY2 Gm24514-201ENSMUST00000174961 285 ntBASIC12.96□□□□□ -0.33
Pcdhga6Q91XY2 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.96□□□□□ -0.33
Pcdhga6Q91XY2 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.96□□□□□ -0.33
Pcdhga6Q91XY2 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.96□□□□□ -0.33
Pcdhga6Q91XY2 Gm29608-201ENSMUST00000190444 463 ntBASIC12.96□□□□□ -0.33
Pcdhga6Q91XY2 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.96□□□□□ -0.33
Pcdhga6Q91XY2 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.96□□□□□ -0.33
Pcdhga6Q91XY2 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.96□□□□□ -0.33
Pcdhga6Q91XY2 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.96□□□□□ -0.33
Pcdhga6Q91XY2 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga6Q91XY2 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga6Q91XY2 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga6Q91XY2 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga6Q91XY2 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga6Q91XY2 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga6Q91XY2 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdhga6Q91XY2 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhga6Q91XY2 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Pcdhga6Q91XY2 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhga6Q91XY2 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.96□□□□□ -0.34
Pcdhga6Q91XY2 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.96□□□□□ -0.34
Pcdhga6Q91XY2 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhga6Q91XY2 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhga6Q91XY2 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Pcdhga6Q91XY2 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhga6Q91XY2 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhga6Q91XY2 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdhga6Q91XY2 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga6Q91XY2 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga6Q91XY2 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga6Q91XY2 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.95□□□□□ -0.34
Pcdhga6Q91XY2 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.95□□□□□ -0.34
Pcdhga6Q91XY2 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga6Q91XY2 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga6Q91XY2 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.95□□□□□ -0.34
Pcdhga6Q91XY2 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga6Q91XY2 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga6Q91XY2 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga6Q91XY2 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga6Q91XY2 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga6Q91XY2 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga6Q91XY2 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Pcdhga6Q91XY2 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga6Q91XY2 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Pcdhga6Q91XY2 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga6Q91XY2 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC12.95□□□□□ -0.34
Pcdhga6Q91XY2 Gm15770-201ENSMUST00000117498 584 ntBASIC12.95□□□□□ -0.34
Pcdhga6Q91XY2 Gm4909-201ENSMUST00000118749 794 ntBASIC12.95□□□□□ -0.34
Pcdhga6Q91XY2 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga6Q91XY2 Gm8584-201ENSMUST00000171982 758 ntBASIC12.95□□□□□ -0.34
Pcdhga6Q91XY2 Gm6222-202ENSMUST00000182143 629 ntBASIC12.95□□□□□ -0.34
Pcdhga6Q91XY2 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.95□□□□□ -0.34
Pcdhga6Q91XY2 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC12.95□□□□□ -0.34
Pcdhga6Q91XY2 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.95□□□□□ -0.34
Pcdhga6Q91XY2 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.95□□□□□ -0.34
Pcdhga6Q91XY2 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga6Q91XY2 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga6Q91XY2 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Pcdhga6Q91XY2 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga6Q91XY2 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga6Q91XY2 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Pcdhga6Q91XY2 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga6Q91XY2 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga6Q91XY2 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.95□□□□□ -0.34
Pcdhga6Q91XY2 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga6Q91XY2 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga6Q91XY2 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga6Q91XY2 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdhga6Q91XY2 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Pcdhga6Q91XY2 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
Pcdhga6Q91XY2 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhga6Q91XY2 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhga6Q91XY2 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhga6Q91XY2 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms