Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 Gm14767-201ENSMUST00000121559 586 ntBASIC10.58□□□□□ -0.72
Nup35Q8R4R6 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 Gm7390-201ENSMUST00000212452 1216 ntBASIC10.58□□□□□ -0.72
Nup35Q8R4R6 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 AC225888.1-201ENSMUST00000227184 728 ntBASIC10.58□□□□□ -0.72
Nup35Q8R4R6 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC10.58□□□□□ -0.72
Nup35Q8R4R6 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Nup35Q8R4R6 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nup35Q8R4R6 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nup35Q8R4R6 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nup35Q8R4R6 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nup35Q8R4R6 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Nup35Q8R4R6 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nup35Q8R4R6 Gm44094-201ENSMUST00000204703 2030 ntBASIC10.57□□□□□ -0.72
Nup35Q8R4R6 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
Nup35Q8R4R6 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Nup35Q8R4R6 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Nup35Q8R4R6 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nup35Q8R4R6 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC10.57□□□□□ -0.72
Nup35Q8R4R6 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC10.57□□□□□ -0.72
Nup35Q8R4R6 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Nup35Q8R4R6 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
Nup35Q8R4R6 Gm27741-201ENSMUST00000185060 237 ntBASIC10.57□□□□□ -0.72
Nup35Q8R4R6 Gm29608-201ENSMUST00000190444 463 ntBASIC10.57□□□□□ -0.72
Nup35Q8R4R6 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Nup35Q8R4R6 Gm44124-201ENSMUST00000204159 472 ntBASIC10.57□□□□□ -0.72
Nup35Q8R4R6 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nup35Q8R4R6 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nup35Q8R4R6 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nup35Q8R4R6 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nup35Q8R4R6 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nup35Q8R4R6 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Nup35Q8R4R6 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nup35Q8R4R6 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Nup35Q8R4R6 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nup35Q8R4R6 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Nup35Q8R4R6 Gm36970-201ENSMUST00000193688 1859 ntBASIC10.57□□□□□ -0.72
Nup35Q8R4R6 Paupar-201ENSMUST00000194826 3482 ntBASIC10.57□□□□□ -0.72
Nup35Q8R4R6 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
Nup35Q8R4R6 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nup35Q8R4R6 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Nup35Q8R4R6 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Nup35Q8R4R6 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nup35Q8R4R6 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC10.57□□□□□ -0.72
Nup35Q8R4R6 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Nup35Q8R4R6 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Nup35Q8R4R6 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nup35Q8R4R6 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nup35Q8R4R6 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC10.56□□□□□ -0.72
Nup35Q8R4R6 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nup35Q8R4R6 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nup35Q8R4R6 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Nup35Q8R4R6 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nup35Q8R4R6 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Nup35Q8R4R6 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Nup35Q8R4R6 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Nup35Q8R4R6 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC10.56□□□□□ -0.72
Nup35Q8R4R6 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Nup35Q8R4R6 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Nup35Q8R4R6 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nup35Q8R4R6 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nup35Q8R4R6 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nup35Q8R4R6 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nup35Q8R4R6 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nup35Q8R4R6 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Nup35Q8R4R6 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nup35Q8R4R6 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Nup35Q8R4R6 Gm11400-201ENSMUST00000120853 1214 ntBASIC10.56□□□□□ -0.72
Nup35Q8R4R6 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms