Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC15.13■□□□□ 0.01
Vps53Q8CCB4 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps53Q8CCB4 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Vps53Q8CCB4 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Vps53Q8CCB4 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Vps53Q8CCB4 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vps53Q8CCB4 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC15.13■□□□□ 0.01
Vps53Q8CCB4 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Vps53Q8CCB4 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC15.13■□□□□ 0.01
Vps53Q8CCB4 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps53Q8CCB4 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vps53Q8CCB4 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Vps53Q8CCB4 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vps53Q8CCB4 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps53Q8CCB4 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps53Q8CCB4 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC15.12■□□□□ 0.01
Vps53Q8CCB4 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps53Q8CCB4 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps53Q8CCB4 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps53Q8CCB4 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Vps53Q8CCB4 Gm43423-201ENSMUST00000198390 2094 ntBASIC15.12■□□□□ 0.01
Vps53Q8CCB4 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Vps53Q8CCB4 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Vps53Q8CCB4 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps53Q8CCB4 Gm37644-201ENSMUST00000192190 2270 ntBASIC15.12■□□□□ 0.01
Vps53Q8CCB4 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vps53Q8CCB4 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps53Q8CCB4 Mir874-201ENSMUST00000104769 76 ntBASIC15.12■□□□□ 0.01
Vps53Q8CCB4 Gm11803-201ENSMUST00000119966 444 ntBASIC15.12■□□□□ 0.01
Vps53Q8CCB4 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC15.12■□□□□ 0.01
Vps53Q8CCB4 Gm18054-201ENSMUST00000207539 555 ntBASIC15.12■□□□□ 0.01
Vps53Q8CCB4 Gm17870-201ENSMUST00000219489 1174 ntBASIC15.12■□□□□ 0.01
Vps53Q8CCB4 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps53Q8CCB4 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Vps53Q8CCB4 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC15.12■□□□□ 0.01
Vps53Q8CCB4 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vps53Q8CCB4 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps53Q8CCB4 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps53Q8CCB4 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps53Q8CCB4 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps53Q8CCB4 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps53Q8CCB4 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps53Q8CCB4 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps53Q8CCB4 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Vps53Q8CCB4 Gm12846-201ENSMUST00000120431 1373 ntBASIC15.11■□□□□ 0.01
Vps53Q8CCB4 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps53Q8CCB4 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps53Q8CCB4 AC121805.2-201ENSMUST00000218808 2538 ntBASIC15.11■□□□□ 0.01
Vps53Q8CCB4 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vps53Q8CCB4 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Vps53Q8CCB4 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps53Q8CCB4 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps53Q8CCB4 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Vps53Q8CCB4 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps53Q8CCB4 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vps53Q8CCB4 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps53Q8CCB4 Mir7221-201ENSMUST00000184009 72 ntBASIC15.11■□□□□ 0.01
Vps53Q8CCB4 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vps53Q8CCB4 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC15.11■□□□□ 0.01
Vps53Q8CCB4 Gm38144-201ENSMUST00000192790 465 ntBASIC15.11■□□□□ 0.01
Vps53Q8CCB4 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Vps53Q8CCB4 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vps53Q8CCB4 CU024892.2-201ENSMUST00000224608 832 ntBASIC15.11■□□□□ 0.01
Vps53Q8CCB4 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Vps53Q8CCB4 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps53Q8CCB4 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Vps53Q8CCB4 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps53Q8CCB4 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vps53Q8CCB4 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps53Q8CCB4 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps53Q8CCB4 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps53Q8CCB4 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps53Q8CCB4 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Vps53Q8CCB4 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps53Q8CCB4 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps53Q8CCB4 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps53Q8CCB4 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps53Q8CCB4 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps53Q8CCB4 Gm37861-201ENSMUST00000193534 2869 ntBASIC15.1■□□□□ 0.01
Vps53Q8CCB4 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps53Q8CCB4 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps53Q8CCB4 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Vps53Q8CCB4 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Vps53Q8CCB4 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vps53Q8CCB4 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps53Q8CCB4 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Vps53Q8CCB4 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps53Q8CCB4 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Vps53Q8CCB4 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps53Q8CCB4 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vps53Q8CCB4 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps53Q8CCB4 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vps53Q8CCB4 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC15.1■□□□□ 0.01
Vps53Q8CCB4 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC15.1■□□□□ 0.01
Vps53Q8CCB4 Gm6152-201ENSMUST00000151704 340 ntBASIC15.1■□□□□ 0.01
Vps53Q8CCB4 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps53Q8CCB4 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps53Q8CCB4 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Vps53Q8CCB4 Gm45880-201ENSMUST00000213041 853 ntBASIC15.1■□□□□ 0.01
Vps53Q8CCB4 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms