Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shisa4Q8CA71 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shisa4Q8CA71 Gm7993-201ENSMUST00000200970 1384 ntBASIC15□□□□□ -0.01
Shisa4Q8CA71 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC15□□□□□ -0.01
Shisa4Q8CA71 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shisa4Q8CA71 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15□□□□□ -0.01
Shisa4Q8CA71 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Shisa4Q8CA71 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Shisa4Q8CA71 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shisa4Q8CA71 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Shisa4Q8CA71 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
Shisa4Q8CA71 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Shisa4Q8CA71 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Shisa4Q8CA71 Mir877-201ENSMUST00000104738 85 ntBASIC15□□□□□ -0.01
Shisa4Q8CA71 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC15□□□□□ -0.01
Shisa4Q8CA71 Gm12502-201ENSMUST00000120197 444 ntBASIC15□□□□□ -0.01
Shisa4Q8CA71 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC15□□□□□ -0.01
Shisa4Q8CA71 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC15□□□□□ -0.01
Shisa4Q8CA71 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC15□□□□□ -0.01
Shisa4Q8CA71 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC15□□□□□ -0.01
Shisa4Q8CA71 Gm6652-201ENSMUST00000186414 1070 ntBASIC15□□□□□ -0.01
Shisa4Q8CA71 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shisa4Q8CA71 AC165260.3-202ENSMUST00000224550 1031 ntBASIC15□□□□□ -0.01
Shisa4Q8CA71 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shisa4Q8CA71 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Shisa4Q8CA71 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Shisa4Q8CA71 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shisa4Q8CA71 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shisa4Q8CA71 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shisa4Q8CA71 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shisa4Q8CA71 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Shisa4Q8CA71 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC15□□□□□ -0.01
Shisa4Q8CA71 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC15□□□□□ -0.01
Shisa4Q8CA71 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shisa4Q8CA71 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Shisa4Q8CA71 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Shisa4Q8CA71 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Shisa4Q8CA71 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Shisa4Q8CA71 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Shisa4Q8CA71 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shisa4Q8CA71 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Shisa4Q8CA71 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Shisa4Q8CA71 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shisa4Q8CA71 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Shisa4Q8CA71 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shisa4Q8CA71 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shisa4Q8CA71 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Shisa4Q8CA71 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Shisa4Q8CA71 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shisa4Q8CA71 Gm14921-201ENSMUST00000118643 908 ntBASIC14.99□□□□□ -0.01
Shisa4Q8CA71 Gm13786-201ENSMUST00000122371 333 ntBASIC14.99□□□□□ -0.01
Shisa4Q8CA71 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Shisa4Q8CA71 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Shisa4Q8CA71 Gm26083-201ENSMUST00000157904 193 ntBASIC14.99□□□□□ -0.01
Shisa4Q8CA71 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC14.99□□□□□ -0.01
Shisa4Q8CA71 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC14.99□□□□□ -0.01
Shisa4Q8CA71 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC14.99□□□□□ -0.01
Shisa4Q8CA71 Gm44364-201ENSMUST00000198368 141 ntBASIC14.99□□□□□ -0.01
Shisa4Q8CA71 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC14.99□□□□□ -0.01
Shisa4Q8CA71 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC14.99□□□□□ -0.01
Shisa4Q8CA71 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shisa4Q8CA71 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Shisa4Q8CA71 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Shisa4Q8CA71 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shisa4Q8CA71 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shisa4Q8CA71 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shisa4Q8CA71 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Shisa4Q8CA71 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shisa4Q8CA71 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Shisa4Q8CA71 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC14.99□□□□□ -0.01
Shisa4Q8CA71 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shisa4Q8CA71 Gm6992-201ENSMUST00000217973 1607 ntBASIC14.99□□□□□ -0.01
Shisa4Q8CA71 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Shisa4Q8CA71 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shisa4Q8CA71 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shisa4Q8CA71 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Shisa4Q8CA71 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Shisa4Q8CA71 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.98□□□□□ -0.01
Shisa4Q8CA71 Gm43858-201ENSMUST00000199418 1778 ntBASIC14.98□□□□□ -0.01
Shisa4Q8CA71 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shisa4Q8CA71 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shisa4Q8CA71 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shisa4Q8CA71 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shisa4Q8CA71 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Shisa4Q8CA71 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Shisa4Q8CA71 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Shisa4Q8CA71 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shisa4Q8CA71 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shisa4Q8CA71 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shisa4Q8CA71 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Shisa4Q8CA71 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Shisa4Q8CA71 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC14.98□□□□□ -0.01
Shisa4Q8CA71 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Shisa4Q8CA71 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Shisa4Q8CA71 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC14.98□□□□□ -0.01
Shisa4Q8CA71 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shisa4Q8CA71 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Shisa4Q8CA71 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Shisa4Q8CA71 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Shisa4Q8CA71 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms