Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Col6a6Q8C6K9 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a6Q8C6K9 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC11.68□□□□□ -0.54
Col6a6Q8C6K9 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a6Q8C6K9 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.68□□□□□ -0.54
Col6a6Q8C6K9 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Col6a6Q8C6K9 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a6Q8C6K9 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Col6a6Q8C6K9 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a6Q8C6K9 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Col6a6Q8C6K9 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Col6a6Q8C6K9 Gm12015-201ENSMUST00000117065 843 ntBASIC11.68□□□□□ -0.54
Col6a6Q8C6K9 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Col6a6Q8C6K9 Gm17391-201ENSMUST00000171036 126 ntBASIC11.68□□□□□ -0.54
Col6a6Q8C6K9 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.68□□□□□ -0.54
Col6a6Q8C6K9 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a6Q8C6K9 AC154849.4-201ENSMUST00000224868 365 ntBASIC11.68□□□□□ -0.54
Col6a6Q8C6K9 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.68□□□□□ -0.54
Col6a6Q8C6K9 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a6Q8C6K9 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a6Q8C6K9 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a6Q8C6K9 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a6Q8C6K9 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a6Q8C6K9 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a6Q8C6K9 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a6Q8C6K9 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a6Q8C6K9 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a6Q8C6K9 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a6Q8C6K9 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col6a6Q8C6K9 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 Gm13408-201ENSMUST00000119822 798 ntBASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 Gm13935-201ENSMUST00000121859 798 ntBASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 Gm37201-201ENSMUST00000191845 523 ntBASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 AC140293.1-201ENSMUST00000225626 1247 ntBASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 Gm6963-201ENSMUST00000147879 379 ntBASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 Gm19459-201ENSMUST00000176240 835 ntBASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 Gm44100-201ENSMUST00000204329 436 ntBASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col6a6Q8C6K9 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a6Q8C6K9 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a6Q8C6K9 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a6Q8C6K9 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a6Q8C6K9 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Col6a6Q8C6K9 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a6Q8C6K9 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Col6a6Q8C6K9 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a6Q8C6K9 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.66□□□□□ -0.54
Col6a6Q8C6K9 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a6Q8C6K9 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a6Q8C6K9 Gm44651-201ENSMUST00000207343 372 ntBASIC11.66□□□□□ -0.54
Col6a6Q8C6K9 AC125486.1-201ENSMUST00000218701 320 ntBASIC11.66□□□□□ -0.54
Col6a6Q8C6K9 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a6Q8C6K9 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Col6a6Q8C6K9 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms