Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim47Q8C0E3 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim47Q8C0E3 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
Trim47Q8C0E3 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim47Q8C0E3 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.38□□□□□ -0.11
Trim47Q8C0E3 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim47Q8C0E3 AC137842.1-201ENSMUST00000227896 2064 ntBASIC14.38□□□□□ -0.11
Trim47Q8C0E3 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim47Q8C0E3 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim47Q8C0E3 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trim47Q8C0E3 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Trim47Q8C0E3 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim47Q8C0E3 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim47Q8C0E3 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim47Q8C0E3 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim47Q8C0E3 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14.38□□□□□ -0.11
Trim47Q8C0E3 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim47Q8C0E3 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim47Q8C0E3 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim47Q8C0E3 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim47Q8C0E3 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC14.38□□□□□ -0.11
Trim47Q8C0E3 Gm5940-201ENSMUST00000117582 1068 ntBASIC14.38□□□□□ -0.11
Trim47Q8C0E3 Gm11658-201ENSMUST00000120913 1008 ntBASIC14.38□□□□□ -0.11
Trim47Q8C0E3 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC14.38□□□□□ -0.11
Trim47Q8C0E3 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC14.38□□□□□ -0.11
Trim47Q8C0E3 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC14.38□□□□□ -0.11
Trim47Q8C0E3 Gm16379-201ENSMUST00000161469 348 ntBASIC14.38□□□□□ -0.11
Trim47Q8C0E3 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim47Q8C0E3 Gm2467-201ENSMUST00000182266 1010 ntBASIC14.38□□□□□ -0.11
Trim47Q8C0E3 Gm6981-201ENSMUST00000182467 1008 ntBASIC14.38□□□□□ -0.11
Trim47Q8C0E3 Gm8762-201ENSMUST00000193486 339 ntBASIC14.38□□□□□ -0.11
Trim47Q8C0E3 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim47Q8C0E3 Gm7399-201ENSMUST00000032395 858 ntBASIC14.38□□□□□ -0.11
Trim47Q8C0E3 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim47Q8C0E3 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trim47Q8C0E3 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim47Q8C0E3 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim47Q8C0E3 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim47Q8C0E3 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim47Q8C0E3 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim47Q8C0E3 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.38□□□□□ -0.11
Trim47Q8C0E3 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trim47Q8C0E3 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim47Q8C0E3 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim47Q8C0E3 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim47Q8C0E3 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim47Q8C0E3 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim47Q8C0E3 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim47Q8C0E3 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim47Q8C0E3 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim47Q8C0E3 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim47Q8C0E3 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim47Q8C0E3 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim47Q8C0E3 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim47Q8C0E3 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim47Q8C0E3 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.37□□□□□ -0.11
Trim47Q8C0E3 Gm42853-201ENSMUST00000201273 1387 ntBASIC14.37□□□□□ -0.11
Trim47Q8C0E3 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim47Q8C0E3 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim47Q8C0E3 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim47Q8C0E3 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim47Q8C0E3 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trim47Q8C0E3 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim47Q8C0E3 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim47Q8C0E3 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim47Q8C0E3 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim47Q8C0E3 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC14.37□□□□□ -0.11
Trim47Q8C0E3 Gm9431-201ENSMUST00000119765 1051 ntBASIC14.37□□□□□ -0.11
Trim47Q8C0E3 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim47Q8C0E3 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim47Q8C0E3 Gm3890-201ENSMUST00000182416 207 ntBASIC14.37□□□□□ -0.11
Trim47Q8C0E3 Gm43133-201ENSMUST00000197472 463 ntBASIC14.37□□□□□ -0.11
Trim47Q8C0E3 Gm43118-201ENSMUST00000199149 775 ntBASIC14.37□□□□□ -0.11
Trim47Q8C0E3 Ighv8-10-201ENSMUST00000199579 358 ntBASIC14.37□□□□□ -0.11
Trim47Q8C0E3 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim47Q8C0E3 Gm45930-201ENSMUST00000221330 292 ntBASIC14.37□□□□□ -0.11
Trim47Q8C0E3 AC154462.2-201ENSMUST00000227519 370 ntBASIC14.37□□□□□ -0.11
Trim47Q8C0E3 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim47Q8C0E3 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trim47Q8C0E3 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trim47Q8C0E3 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim47Q8C0E3 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim47Q8C0E3 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
Trim47Q8C0E3 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim47Q8C0E3 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim47Q8C0E3 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim47Q8C0E3 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim47Q8C0E3 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trim47Q8C0E3 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim47Q8C0E3 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Trim47Q8C0E3 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim47Q8C0E3 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim47Q8C0E3 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim47Q8C0E3 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim47Q8C0E3 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim47Q8C0E3 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim47Q8C0E3 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim47Q8C0E3 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim47Q8C0E3 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim47Q8C0E3 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms