Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smco3Q8BQM7 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smco3Q8BQM7 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smco3Q8BQM7 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Smco3Q8BQM7 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smco3Q8BQM7 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smco3Q8BQM7 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC10.68□□□□□ -0.7
Smco3Q8BQM7 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smco3Q8BQM7 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smco3Q8BQM7 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smco3Q8BQM7 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smco3Q8BQM7 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smco3Q8BQM7 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Smco3Q8BQM7 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smco3Q8BQM7 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smco3Q8BQM7 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Smco3Q8BQM7 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Smco3Q8BQM7 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Smco3Q8BQM7 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Smco3Q8BQM7 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smco3Q8BQM7 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smco3Q8BQM7 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Smco3Q8BQM7 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC10.67□□□□□ -0.7
Smco3Q8BQM7 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smco3Q8BQM7 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Smco3Q8BQM7 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Smco3Q8BQM7 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smco3Q8BQM7 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Smco3Q8BQM7 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smco3Q8BQM7 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smco3Q8BQM7 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC10.67□□□□□ -0.7
Smco3Q8BQM7 Gm5566-201ENSMUST00000116118 459 ntBASIC10.67□□□□□ -0.7
Smco3Q8BQM7 Gm15460-201ENSMUST00000118147 391 ntBASIC10.67□□□□□ -0.7
Smco3Q8BQM7 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC10.67□□□□□ -0.7
Smco3Q8BQM7 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Smco3Q8BQM7 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC10.67□□□□□ -0.7
Smco3Q8BQM7 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC10.67□□□□□ -0.7
Smco3Q8BQM7 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC10.67□□□□□ -0.7
Smco3Q8BQM7 Gm45612-201ENSMUST00000211320 160 ntBASIC10.67□□□□□ -0.7
Smco3Q8BQM7 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.67□□□□□ -0.7
Smco3Q8BQM7 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Smco3Q8BQM7 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Smco3Q8BQM7 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smco3Q8BQM7 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smco3Q8BQM7 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Smco3Q8BQM7 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smco3Q8BQM7 AC241621.2-201ENSMUST00000223991 2151 ntBASIC10.67□□□□□ -0.7
Smco3Q8BQM7 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smco3Q8BQM7 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Smco3Q8BQM7 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smco3Q8BQM7 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Smco3Q8BQM7 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Smco3Q8BQM7 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smco3Q8BQM7 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smco3Q8BQM7 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Smco3Q8BQM7 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Smco3Q8BQM7 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Smco3Q8BQM7 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC10.67□□□□□ -0.7
Smco3Q8BQM7 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Smco3Q8BQM7 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
Smco3Q8BQM7 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC10.66□□□□□ -0.7
Smco3Q8BQM7 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smco3Q8BQM7 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smco3Q8BQM7 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smco3Q8BQM7 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smco3Q8BQM7 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smco3Q8BQM7 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smco3Q8BQM7 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Smco3Q8BQM7 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smco3Q8BQM7 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC10.66□□□□□ -0.7
Smco3Q8BQM7 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smco3Q8BQM7 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smco3Q8BQM7 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smco3Q8BQM7 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Smco3Q8BQM7 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smco3Q8BQM7 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC10.66□□□□□ -0.7
Smco3Q8BQM7 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC10.66□□□□□ -0.7
Smco3Q8BQM7 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC10.66□□□□□ -0.7
Smco3Q8BQM7 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC10.66□□□□□ -0.7
Smco3Q8BQM7 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC10.66□□□□□ -0.7
Smco3Q8BQM7 Gm45683-201ENSMUST00000210825 1247 ntBASIC10.66□□□□□ -0.7
Smco3Q8BQM7 AC154806.6-201ENSMUST00000228192 202 ntBASIC10.66□□□□□ -0.7
Smco3Q8BQM7 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smco3Q8BQM7 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Smco3Q8BQM7 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smco3Q8BQM7 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Smco3Q8BQM7 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smco3Q8BQM7 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smco3Q8BQM7 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smco3Q8BQM7 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smco3Q8BQM7 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smco3Q8BQM7 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smco3Q8BQM7 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smco3Q8BQM7 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC10.66□□□□□ -0.7
Smco3Q8BQM7 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smco3Q8BQM7 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Smco3Q8BQM7 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC10.66□□□□□ -0.7
Smco3Q8BQM7 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC10.66□□□□□ -0.7
Smco3Q8BQM7 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smco3Q8BQM7 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms