Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp54Q8BL06 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Usp54Q8BL06 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Usp54Q8BL06 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Usp54Q8BL06 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Usp54Q8BL06 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp54Q8BL06 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC18.1■□□□□ 0.49
Usp54Q8BL06 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp54Q8BL06 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Usp54Q8BL06 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC18.1■□□□□ 0.49
Usp54Q8BL06 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp54Q8BL06 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp54Q8BL06 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Usp54Q8BL06 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Usp54Q8BL06 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Usp54Q8BL06 Gm10676-201ENSMUST00000098778 3221 ntBASIC18.1■□□□□ 0.49
Usp54Q8BL06 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp54Q8BL06 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp54Q8BL06 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Usp54Q8BL06 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp54Q8BL06 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Usp54Q8BL06 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
Usp54Q8BL06 Gm22133-201ENSMUST00000102082 109 ntBASIC18.09■□□□□ 0.49
Usp54Q8BL06 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp54Q8BL06 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC18.09■□□□□ 0.49
Usp54Q8BL06 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Usp54Q8BL06 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Usp54Q8BL06 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp54Q8BL06 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Usp54Q8BL06 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Usp54Q8BL06 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp54Q8BL06 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp54Q8BL06 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp54Q8BL06 Gm6580-201ENSMUST00000117504 1357 ntBASIC18.09■□□□□ 0.49
Usp54Q8BL06 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Usp54Q8BL06 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp54Q8BL06 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Usp54Q8BL06 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Usp54Q8BL06 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Usp54Q8BL06 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Usp54Q8BL06 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Usp54Q8BL06 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC18.09■□□□□ 0.49
Usp54Q8BL06 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Usp54Q8BL06 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Usp54Q8BL06 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Usp54Q8BL06 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Usp54Q8BL06 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Usp54Q8BL06 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC18.08■□□□□ 0.49
Usp54Q8BL06 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Usp54Q8BL06 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Usp54Q8BL06 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.49
Usp54Q8BL06 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Usp54Q8BL06 Gm9022-201ENSMUST00000182482 992 ntBASIC18.08■□□□□ 0.49
Usp54Q8BL06 Gm42682-201ENSMUST00000198349 1265 ntBASIC18.08■□□□□ 0.49
Usp54Q8BL06 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC18.08■□□□□ 0.49
Usp54Q8BL06 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Usp54Q8BL06 Gm1821-202ENSMUST00000227415 750 ntBASIC18.08■□□□□ 0.49
Usp54Q8BL06 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Usp54Q8BL06 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Usp54Q8BL06 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Usp54Q8BL06 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Usp54Q8BL06 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Usp54Q8BL06 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp54Q8BL06 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
Usp54Q8BL06 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Usp54Q8BL06 Gm21998-201ENSMUST00000117552 1308 ntBASIC18.08■□□□□ 0.48
Usp54Q8BL06 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp54Q8BL06 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp54Q8BL06 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp54Q8BL06 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp54Q8BL06 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Usp54Q8BL06 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.48
Usp54Q8BL06 Gm5638-201ENSMUST00000118618 1258 ntBASIC18.08■□□□□ 0.48
Usp54Q8BL06 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC18.08■□□□□ 0.48
Usp54Q8BL06 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC18.08■□□□□ 0.48
Usp54Q8BL06 Gm9540-201ENSMUST00000188230 478 ntBASIC18.08■□□□□ 0.48
Usp54Q8BL06 Gm4482-201ENSMUST00000200876 742 ntBASIC18.08■□□□□ 0.48
Usp54Q8BL06 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Usp54Q8BL06 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Usp54Q8BL06 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC18.08■□□□□ 0.48
Usp54Q8BL06 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Usp54Q8BL06 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Usp54Q8BL06 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Usp54Q8BL06 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp54Q8BL06 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Usp54Q8BL06 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp54Q8BL06 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp54Q8BL06 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Usp54Q8BL06 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Usp54Q8BL06 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Usp54Q8BL06 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp54Q8BL06 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC18.07■□□□□ 0.48
Usp54Q8BL06 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC18.07■□□□□ 0.48
Usp54Q8BL06 Gm11509-201ENSMUST00000117358 325 ntBASIC18.07■□□□□ 0.48
Usp54Q8BL06 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp54Q8BL06 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
Usp54Q8BL06 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Usp54Q8BL06 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC18.07■□□□□ 0.48
Usp54Q8BL06 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC18.07■□□□□ 0.48
Usp54Q8BL06 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms