Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd1Q6PIP5 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd1Q6PIP5 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Nudcd1Q6PIP5 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd1Q6PIP5 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd1Q6PIP5 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.1□□□□□ -0.31
Nudcd1Q6PIP5 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd1Q6PIP5 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd1Q6PIP5 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd1Q6PIP5 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd1Q6PIP5 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.1□□□□□ -0.31
Nudcd1Q6PIP5 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.1□□□□□ -0.31
Nudcd1Q6PIP5 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd1Q6PIP5 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nudcd1Q6PIP5 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Nudcd1Q6PIP5 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nudcd1Q6PIP5 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Nudcd1Q6PIP5 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13.09□□□□□ -0.31
Nudcd1Q6PIP5 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nudcd1Q6PIP5 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nudcd1Q6PIP5 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nudcd1Q6PIP5 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nudcd1Q6PIP5 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nudcd1Q6PIP5 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Nudcd1Q6PIP5 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nudcd1Q6PIP5 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Nudcd1Q6PIP5 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nudcd1Q6PIP5 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nudcd1Q6PIP5 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nudcd1Q6PIP5 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Nudcd1Q6PIP5 Gm12363-201ENSMUST00000122250 668 ntBASIC13.09□□□□□ -0.31
Nudcd1Q6PIP5 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nudcd1Q6PIP5 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nudcd1Q6PIP5 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nudcd1Q6PIP5 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.09□□□□□ -0.31
Nudcd1Q6PIP5 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.09□□□□□ -0.31
Nudcd1Q6PIP5 Gm24548-201ENSMUST00000158650 108 ntBASIC13.09□□□□□ -0.31
Nudcd1Q6PIP5 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nudcd1Q6PIP5 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nudcd1Q6PIP5 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nudcd1Q6PIP5 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nudcd1Q6PIP5 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.09□□□□□ -0.31
Nudcd1Q6PIP5 Gm38266-201ENSMUST00000194931 421 ntBASIC13.09□□□□□ -0.31
Nudcd1Q6PIP5 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.09□□□□□ -0.31
Nudcd1Q6PIP5 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.09□□□□□ -0.31
Nudcd1Q6PIP5 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nudcd1Q6PIP5 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nudcd1Q6PIP5 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nudcd1Q6PIP5 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nudcd1Q6PIP5 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Nudcd1Q6PIP5 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nudcd1Q6PIP5 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nudcd1Q6PIP5 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Nudcd1Q6PIP5 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Nudcd1Q6PIP5 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nudcd1Q6PIP5 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nudcd1Q6PIP5 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nudcd1Q6PIP5 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nudcd1Q6PIP5 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nudcd1Q6PIP5 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nudcd1Q6PIP5 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.09□□□□□ -0.31
Nudcd1Q6PIP5 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.09□□□□□ -0.31
Nudcd1Q6PIP5 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Nudcd1Q6PIP5 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Nudcd1Q6PIP5 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Nudcd1Q6PIP5 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nudcd1Q6PIP5 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Nudcd1Q6PIP5 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nudcd1Q6PIP5 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nudcd1Q6PIP5 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Nudcd1Q6PIP5 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nudcd1Q6PIP5 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nudcd1Q6PIP5 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC13.08□□□□□ -0.32
Nudcd1Q6PIP5 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC13.08□□□□□ -0.32
Nudcd1Q6PIP5 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.08□□□□□ -0.32
Nudcd1Q6PIP5 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.08□□□□□ -0.32
Nudcd1Q6PIP5 Gm6222-202ENSMUST00000182143 629 ntBASIC13.08□□□□□ -0.32
Nudcd1Q6PIP5 Mir8109-201ENSMUST00000184375 117 ntBASIC13.08□□□□□ -0.32
Nudcd1Q6PIP5 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nudcd1Q6PIP5 Gm5850-201ENSMUST00000192923 1206 ntBASIC13.08□□□□□ -0.32
Nudcd1Q6PIP5 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC13.08□□□□□ -0.32
Nudcd1Q6PIP5 Olfr284-202ENSMUST00000206647 966 ntBASIC13.08□□□□□ -0.32
Nudcd1Q6PIP5 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nudcd1Q6PIP5 Gm45930-201ENSMUST00000221330 292 ntBASIC13.08□□□□□ -0.32
Nudcd1Q6PIP5 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Nudcd1Q6PIP5 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Nudcd1Q6PIP5 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nudcd1Q6PIP5 Olfr582-201ENSMUST00000098212 960 ntBASIC13.08□□□□□ -0.32
Nudcd1Q6PIP5 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nudcd1Q6PIP5 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.08□□□□□ -0.32
Nudcd1Q6PIP5 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Nudcd1Q6PIP5 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nudcd1Q6PIP5 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nudcd1Q6PIP5 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Nudcd1Q6PIP5 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Nudcd1Q6PIP5 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nudcd1Q6PIP5 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nudcd1Q6PIP5 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Nudcd1Q6PIP5 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nudcd1Q6PIP5 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms