Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col11a2Q64739 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Col11a2Q64739 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC15.33■□□□□ 0.04
Col11a2Q64739 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col11a2Q64739 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col11a2Q64739 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col11a2Q64739 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC15.33■□□□□ 0.04
Col11a2Q64739 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col11a2Q64739 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Col11a2Q64739 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Col11a2Q64739 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Col11a2Q64739 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Col11a2Q64739 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC15.33■□□□□ 0.04
Col11a2Q64739 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Col11a2Q64739 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col11a2Q64739 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col11a2Q64739 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col11a2Q64739 Gm8617-201ENSMUST00000118796 2222 ntBASIC15.32■□□□□ 0.04
Col11a2Q64739 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Col11a2Q64739 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Col11a2Q64739 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Col11a2Q64739 Gm14724-201ENSMUST00000118400 537 ntBASIC15.32■□□□□ 0.04
Col11a2Q64739 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC15.32■□□□□ 0.04
Col11a2Q64739 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col11a2Q64739 Gm23771-201ENSMUST00000178702 110 ntBASIC15.32■□□□□ 0.04
Col11a2Q64739 Gm5852-201ENSMUST00000194119 1021 ntBASIC15.32■□□□□ 0.04
Col11a2Q64739 Gm5542-201ENSMUST00000195485 1089 ntBASIC15.32■□□□□ 0.04
Col11a2Q64739 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col11a2Q64739 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col11a2Q64739 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col11a2Q64739 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col11a2Q64739 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col11a2Q64739 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col11a2Q64739 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col11a2Q64739 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col11a2Q64739 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Col11a2Q64739 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col11a2Q64739 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col11a2Q64739 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col11a2Q64739 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col11a2Q64739 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC15.32■□□□□ 0.04
Col11a2Q64739 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col11a2Q64739 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col11a2Q64739 Gm5639-201ENSMUST00000122305 2403 ntBASIC15.32■□□□□ 0.04
Col11a2Q64739 Gm12857-201ENSMUST00000117678 592 ntBASIC15.31■□□□□ 0.04
Col11a2Q64739 Gm16071-201ENSMUST00000119589 793 ntBASIC15.31■□□□□ 0.04
Col11a2Q64739 Gm13937-201ENSMUST00000121000 988 ntBASIC15.31■□□□□ 0.04
Col11a2Q64739 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col11a2Q64739 Gm8343-201ENSMUST00000182705 994 ntBASIC15.31■□□□□ 0.04
Col11a2Q64739 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col11a2Q64739 Mir6998-201ENSMUST00000183343 64 ntBASIC15.31■□□□□ 0.04
Col11a2Q64739 Gm17826-201ENSMUST00000189720 798 ntBASIC15.31■□□□□ 0.04
Col11a2Q64739 Gm38228-201ENSMUST00000193169 1293 ntBASIC15.31■□□□□ 0.04
Col11a2Q64739 Gm2965-201ENSMUST00000198365 343 ntBASIC15.31■□□□□ 0.04
Col11a2Q64739 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC15.31■□□□□ 0.04
Col11a2Q64739 Mirlet7i-201ENSMUST00000083472 85 ntBASIC15.31■□□□□ 0.04
Col11a2Q64739 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col11a2Q64739 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC15.31■□□□□ 0.04
Col11a2Q64739 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col11a2Q64739 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.31■□□□□ 0.04
Col11a2Q64739 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col11a2Q64739 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col11a2Q64739 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col11a2Q64739 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col11a2Q64739 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col11a2Q64739 AC122314.1-201ENSMUST00000223056 2239 ntBASIC15.31■□□□□ 0.04
Col11a2Q64739 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col11a2Q64739 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col11a2Q64739 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col11a2Q64739 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col11a2Q64739 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col11a2Q64739 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col11a2Q64739 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Col11a2Q64739 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC15.31■□□□□ 0.04
Col11a2Q64739 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC15.31■□□□□ 0.04
Col11a2Q64739 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col11a2Q64739 Gm23153-201ENSMUST00000175323 313 ntBASIC15.31■□□□□ 0.04
Col11a2Q64739 Gm9022-201ENSMUST00000182482 992 ntBASIC15.31■□□□□ 0.04
Col11a2Q64739 Gm37458-201ENSMUST00000194055 410 ntBASIC15.31■□□□□ 0.04
Col11a2Q64739 Gm19166-201ENSMUST00000196041 1063 ntBASIC15.31■□□□□ 0.04
Col11a2Q64739 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC15.31■□□□□ 0.04
Col11a2Q64739 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC15.31■□□□□ 0.04
Col11a2Q64739 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col11a2Q64739 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col11a2Q64739 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col11a2Q64739 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col11a2Q64739 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Col11a2Q64739 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col11a2Q64739 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col11a2Q64739 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col11a2Q64739 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col11a2Q64739 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col11a2Q64739 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col11a2Q64739 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col11a2Q64739 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col11a2Q64739 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col11a2Q64739 Gm7114-201ENSMUST00000190159 1789 ntBASIC15.3■□□□□ 0.04
Col11a2Q64739 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC15.3■□□□□ 0.04
Col11a2Q64739 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col11a2Q64739 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms