Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox17Q61473 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox17Q61473 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox17Q61473 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox17Q61473 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox17Q61473 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sox17Q61473 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sox17Q61473 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox17Q61473 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sox17Q61473 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox17Q61473 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Sox17Q61473 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox17Q61473 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox17Q61473 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sox17Q61473 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Sox17Q61473 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox17Q61473 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox17Q61473 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox17Q61473 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox17Q61473 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox17Q61473 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.15□□□□□ -0.46
Sox17Q61473 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.15□□□□□ -0.46
Sox17Q61473 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox17Q61473 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox17Q61473 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Sox17Q61473 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox17Q61473 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox17Q61473 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox17Q61473 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox17Q61473 Mir449b-201ENSMUST00000104833 80 ntBASIC12.15□□□□□ -0.46
Sox17Q61473 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.15□□□□□ -0.46
Sox17Q61473 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.15□□□□□ -0.46
Sox17Q61473 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.15□□□□□ -0.46
Sox17Q61473 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Sox17Q61473 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.15□□□□□ -0.46
Sox17Q61473 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox17Q61473 Gm27772-201ENSMUST00000184900 187 ntBASIC12.15□□□□□ -0.46
Sox17Q61473 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.15□□□□□ -0.46
Sox17Q61473 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox17Q61473 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox17Q61473 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox17Q61473 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox17Q61473 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox17Q61473 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox17Q61473 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox17Q61473 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox17Q61473 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox17Q61473 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox17Q61473 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox17Q61473 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.15□□□□□ -0.46
Sox17Q61473 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox17Q61473 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox17Q61473 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.47
Sox17Q61473 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Sox17Q61473 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.15□□□□□ -0.47
Sox17Q61473 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.15□□□□□ -0.47
Sox17Q61473 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox17Q61473 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox17Q61473 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox17Q61473 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox17Q61473 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox17Q61473 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.14□□□□□ -0.47
Sox17Q61473 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.14□□□□□ -0.47
Sox17Q61473 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox17Q61473 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox17Q61473 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox17Q61473 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox17Q61473 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox17Q61473 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Sox17Q61473 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.14□□□□□ -0.47
Sox17Q61473 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox17Q61473 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.14□□□□□ -0.47
Sox17Q61473 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.14□□□□□ -0.47
Sox17Q61473 Gm27741-201ENSMUST00000185060 237 ntBASIC12.14□□□□□ -0.47
Sox17Q61473 Gm8000-201ENSMUST00000188378 592 ntBASIC12.14□□□□□ -0.47
Sox17Q61473 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox17Q61473 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox17Q61473 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Sox17Q61473 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Sox17Q61473 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox17Q61473 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox17Q61473 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Sox17Q61473 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox17Q61473 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox17Q61473 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.14□□□□□ -0.47
Sox17Q61473 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Sox17Q61473 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Sox17Q61473 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox17Q61473 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox17Q61473 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox17Q61473 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox17Q61473 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.13□□□□□ -0.47
Sox17Q61473 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Sox17Q61473 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox17Q61473 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox17Q61473 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sox17Q61473 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Sox17Q61473 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox17Q61473 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox17Q61473 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms