Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccne1Q61457 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccne1Q61457 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccne1Q61457 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccne1Q61457 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccne1Q61457 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccne1Q61457 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccne1Q61457 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccne1Q61457 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccne1Q61457 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Ccne1Q61457 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccne1Q61457 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ccne1Q61457 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ccne1Q61457 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccne1Q61457 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccne1Q61457 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC16.8■□□□□ 0.28
Ccne1Q61457 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC16.8■□□□□ 0.28
Ccne1Q61457 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccne1Q61457 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccne1Q61457 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccne1Q61457 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Ccne1Q61457 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccne1Q61457 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Ccne1Q61457 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC16.8■□□□□ 0.28
Ccne1Q61457 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC16.8■□□□□ 0.28
Ccne1Q61457 Gm26361-201ENSMUST00000158868 186 ntBASIC16.8■□□□□ 0.28
Ccne1Q61457 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC16.8■□□□□ 0.28
Ccne1Q61457 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccne1Q61457 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC16.8■□□□□ 0.28
Ccne1Q61457 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccne1Q61457 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccne1Q61457 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccne1Q61457 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccne1Q61457 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccne1Q61457 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccne1Q61457 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccne1Q61457 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccne1Q61457 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccne1Q61457 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccne1Q61457 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccne1Q61457 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccne1Q61457 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccne1Q61457 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccne1Q61457 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccne1Q61457 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccne1Q61457 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccne1Q61457 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccne1Q61457 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC16.79■□□□□ 0.28
Ccne1Q61457 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccne1Q61457 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccne1Q61457 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccne1Q61457 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccne1Q61457 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccne1Q61457 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccne1Q61457 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccne1Q61457 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccne1Q61457 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Ccne1Q61457 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Ccne1Q61457 Gm2673-201ENSMUST00000120958 1608 ntBASIC16.79■□□□□ 0.28
Ccne1Q61457 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
Ccne1Q61457 Gm7857-201ENSMUST00000117957 358 ntBASIC16.79■□□□□ 0.28
Ccne1Q61457 Gm12176-201ENSMUST00000121420 875 ntBASIC16.79■□□□□ 0.28
Ccne1Q61457 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccne1Q61457 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Ccne1Q61457 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccne1Q61457 Gm8018-201ENSMUST00000173536 789 ntBASIC16.79■□□□□ 0.28
Ccne1Q61457 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC16.79■□□□□ 0.28
Ccne1Q61457 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccne1Q61457 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccne1Q61457 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccne1Q61457 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC16.79■□□□□ 0.28
Ccne1Q61457 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccne1Q61457 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccne1Q61457 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccne1Q61457 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccne1Q61457 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccne1Q61457 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccne1Q61457 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccne1Q61457 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccne1Q61457 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccne1Q61457 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccne1Q61457 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
Ccne1Q61457 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccne1Q61457 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccne1Q61457 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccne1Q61457 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC16.78■□□□□ 0.28
Ccne1Q61457 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccne1Q61457 Acot6-202ENSMUST00000222921 3622 ntBASIC16.78■□□□□ 0.28
Ccne1Q61457 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Ccne1Q61457 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccne1Q61457 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccne1Q61457 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccne1Q61457 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ccne1Q61457 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccne1Q61457 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC16.78■□□□□ 0.28
Ccne1Q61457 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccne1Q61457 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccne1Q61457 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccne1Q61457 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Ccne1Q61457 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms