Protein–RNA interactions for Protein: Q5SP85

Ccdc85a, Coiled-coil domain-containing protein 85A, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85aQ5SP85 Gm3287-205ENSMUST00000228893 1332 ntBASIC14.33□□□□□ -0.12
Ccdc85aQ5SP85 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc85aQ5SP85 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc85aQ5SP85 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc85aQ5SP85 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ccdc85aQ5SP85 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc85aQ5SP85 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc85aQ5SP85 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc85aQ5SP85 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc85aQ5SP85 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc85aQ5SP85 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.33□□□□□ -0.12
Ccdc85aQ5SP85 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc85aQ5SP85 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc85aQ5SP85 Gm5884-201ENSMUST00000036712 1479 ntBASIC14.32□□□□□ -0.12
Ccdc85aQ5SP85 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc85aQ5SP85 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ccdc85aQ5SP85 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc85aQ5SP85 Gm37827-201ENSMUST00000194486 1542 ntBASIC14.32□□□□□ -0.12
Ccdc85aQ5SP85 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc85aQ5SP85 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc85aQ5SP85 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc85aQ5SP85 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc85aQ5SP85 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC14.32□□□□□ -0.12
Ccdc85aQ5SP85 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC14.32□□□□□ -0.12
Ccdc85aQ5SP85 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc85aQ5SP85 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc85aQ5SP85 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc85aQ5SP85 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc85aQ5SP85 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc85aQ5SP85 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc85aQ5SP85 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc85aQ5SP85 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc85aQ5SP85 Gm4864-201ENSMUST00000219894 1461 ntBASIC14.31□□□□□ -0.12
Ccdc85aQ5SP85 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc85aQ5SP85 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc85aQ5SP85 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc85aQ5SP85 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ccdc85aQ5SP85 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc85aQ5SP85 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc85aQ5SP85 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc85aQ5SP85 Gm45053-201ENSMUST00000206112 2499 ntBASIC14.31□□□□□ -0.12
Ccdc85aQ5SP85 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ccdc85aQ5SP85 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc85aQ5SP85 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc85aQ5SP85 Gm16481-201ENSMUST00000119074 1227 ntBASIC14.31□□□□□ -0.12
Ccdc85aQ5SP85 Gm13492-201ENSMUST00000119772 665 ntBASIC14.31□□□□□ -0.12
Ccdc85aQ5SP85 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc85aQ5SP85 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc85aQ5SP85 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc85aQ5SP85 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Ccdc85aQ5SP85 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
Ccdc85aQ5SP85 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Ccdc85aQ5SP85 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc85aQ5SP85 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc85aQ5SP85 AC141438.2-201ENSMUST00000215068 271 ntBASIC14.31□□□□□ -0.12
Ccdc85aQ5SP85 AC135114.1-201ENSMUST00000228682 270 ntBASIC14.31□□□□□ -0.12
Ccdc85aQ5SP85 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ccdc85aQ5SP85 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc85aQ5SP85 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc85aQ5SP85 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc85aQ5SP85 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc85aQ5SP85 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc85aQ5SP85 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc85aQ5SP85 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc85aQ5SP85 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ccdc85aQ5SP85 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc85aQ5SP85 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Ccdc85aQ5SP85 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.31□□□□□ -0.12
Ccdc85aQ5SP85 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.31□□□□□ -0.12
Ccdc85aQ5SP85 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc85aQ5SP85 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ccdc85aQ5SP85 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.3□□□□□ -0.12
Ccdc85aQ5SP85 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc85aQ5SP85 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc85aQ5SP85 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc85aQ5SP85 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc85aQ5SP85 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc85aQ5SP85 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc85aQ5SP85 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc85aQ5SP85 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc85aQ5SP85 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc85aQ5SP85 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc85aQ5SP85 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc85aQ5SP85 Gm12058-201ENSMUST00000118614 437 ntBASIC14.3□□□□□ -0.12
Ccdc85aQ5SP85 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC14.3□□□□□ -0.12
Ccdc85aQ5SP85 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC14.3□□□□□ -0.12
Ccdc85aQ5SP85 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc85aQ5SP85 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC14.3□□□□□ -0.12
Ccdc85aQ5SP85 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc85aQ5SP85 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc85aQ5SP85 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc85aQ5SP85 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc85aQ5SP85 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.3□□□□□ -0.12
Ccdc85aQ5SP85 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc85aQ5SP85 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc85aQ5SP85 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc85aQ5SP85 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc85aQ5SP85 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc85aQ5SP85 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc85aQ5SP85 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms