Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ckap2Q3V1H1 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ckap2Q3V1H1 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ckap2Q3V1H1 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ckap2Q3V1H1 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ckap2Q3V1H1 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ckap2Q3V1H1 Snora73a-201ENSMUST00000082453 205 ntBASIC14.86□□□□□ -0.03
Ckap2Q3V1H1 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ckap2Q3V1H1 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Ckap2Q3V1H1 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ckap2Q3V1H1 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ckap2Q3V1H1 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ckap2Q3V1H1 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ckap2Q3V1H1 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ckap2Q3V1H1 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ckap2Q3V1H1 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ckap2Q3V1H1 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC14.86□□□□□ -0.03
Ckap2Q3V1H1 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ckap2Q3V1H1 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Ckap2Q3V1H1 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ckap2Q3V1H1 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ckap2Q3V1H1 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ckap2Q3V1H1 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ckap2Q3V1H1 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ckap2Q3V1H1 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Ckap2Q3V1H1 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ckap2Q3V1H1 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ckap2Q3V1H1 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ckap2Q3V1H1 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ckap2Q3V1H1 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ckap2Q3V1H1 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ckap2Q3V1H1 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ckap2Q3V1H1 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ckap2Q3V1H1 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Ckap2Q3V1H1 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ckap2Q3V1H1 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ckap2Q3V1H1 Gm15824-201ENSMUST00000119516 955 ntBASIC14.85□□□□□ -0.03
Ckap2Q3V1H1 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC14.85□□□□□ -0.03
Ckap2Q3V1H1 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Ckap2Q3V1H1 Gm2639-201ENSMUST00000156881 1297 ntBASIC14.85□□□□□ -0.03
Ckap2Q3V1H1 Gm16296-201ENSMUST00000159905 325 ntBASIC14.85□□□□□ -0.03
Ckap2Q3V1H1 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC14.85□□□□□ -0.03
Ckap2Q3V1H1 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.85□□□□□ -0.03
Ckap2Q3V1H1 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ckap2Q3V1H1 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC14.85□□□□□ -0.03
Ckap2Q3V1H1 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ckap2Q3V1H1 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ckap2Q3V1H1 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ckap2Q3V1H1 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ckap2Q3V1H1 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ckap2Q3V1H1 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Ckap2Q3V1H1 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ckap2Q3V1H1 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ckap2Q3V1H1 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ckap2Q3V1H1 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ckap2Q3V1H1 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ckap2Q3V1H1 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.85□□□□□ -0.03
Ckap2Q3V1H1 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ckap2Q3V1H1 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.85□□□□□ -0.03
Ckap2Q3V1H1 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ckap2Q3V1H1 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ckap2Q3V1H1 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ckap2Q3V1H1 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ckap2Q3V1H1 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ckap2Q3V1H1 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.84□□□□□ -0.03
Ckap2Q3V1H1 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ckap2Q3V1H1 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ckap2Q3V1H1 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Ckap2Q3V1H1 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ckap2Q3V1H1 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ckap2Q3V1H1 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ckap2Q3V1H1 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ckap2Q3V1H1 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ckap2Q3V1H1 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.84□□□□□ -0.03
Ckap2Q3V1H1 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ckap2Q3V1H1 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Ckap2Q3V1H1 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Ckap2Q3V1H1 Gm38092-201ENSMUST00000195600 653 ntBASIC14.84□□□□□ -0.03
Ckap2Q3V1H1 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ckap2Q3V1H1 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Ckap2Q3V1H1 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ckap2Q3V1H1 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ckap2Q3V1H1 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ckap2Q3V1H1 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ckap2Q3V1H1 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ckap2Q3V1H1 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ckap2Q3V1H1 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
Ckap2Q3V1H1 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ckap2Q3V1H1 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ckap2Q3V1H1 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Ckap2Q3V1H1 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ckap2Q3V1H1 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ckap2Q3V1H1 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ckap2Q3V1H1 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Ckap2Q3V1H1 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ckap2Q3V1H1 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ckap2Q3V1H1 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ckap2Q3V1H1 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Ckap2Q3V1H1 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Ckap2Q3V1H1 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms