Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Spg11Q3UHA3 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC11.85□□□□□ -0.51
Spg11Q3UHA3 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Spg11Q3UHA3 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC11.85□□□□□ -0.51
Spg11Q3UHA3 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Spg11Q3UHA3 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Spg11Q3UHA3 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Gm13019-201ENSMUST00000120000 276 ntBASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.84□□□□□ -0.51
Spg11Q3UHA3 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Gm8584-201ENSMUST00000171982 758 ntBASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Gm21092-201ENSMUST00000178995 955 ntBASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Gm29410-201ENSMUST00000188383 694 ntBASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Gm45310-201ENSMUST00000210436 275 ntBASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC11.84□□□□□ -0.51
Spg11Q3UHA3 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Gm9785-201ENSMUST00000062642 1006 ntBASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Spg11Q3UHA3 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Spg11Q3UHA3 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.83□□□□□ -0.52
Spg11Q3UHA3 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Spg11Q3UHA3 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Spg11Q3UHA3 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Spg11Q3UHA3 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Spg11Q3UHA3 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Spg11Q3UHA3 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Spg11Q3UHA3 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Spg11Q3UHA3 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Spg11Q3UHA3 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC11.83□□□□□ -0.52
Spg11Q3UHA3 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Spg11Q3UHA3 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Spg11Q3UHA3 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Spg11Q3UHA3 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Spg11Q3UHA3 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Spg11Q3UHA3 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Spg11Q3UHA3 Gm16425-201ENSMUST00000118143 3130 ntBASIC11.83□□□□□ -0.52
Spg11Q3UHA3 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Spg11Q3UHA3 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Spg11Q3UHA3 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.83□□□□□ -0.52
Spg11Q3UHA3 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Spg11Q3UHA3 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Spg11Q3UHA3 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC11.83□□□□□ -0.52
Spg11Q3UHA3 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC11.83□□□□□ -0.52
Spg11Q3UHA3 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.83□□□□□ -0.52
Spg11Q3UHA3 AC134537.1-201ENSMUST00000219205 265 ntBASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms