Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm44069-201ENSMUST00000204898 506 ntBASIC12.87□□□□□ -0.35
Col9a1Q05722 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC12.87□□□□□ -0.35
Col9a1Q05722 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Col9a1Q05722 Gm5599-201ENSMUST00000209602 788 ntBASIC12.87□□□□□ -0.35
Col9a1Q05722 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.87□□□□□ -0.35
Col9a1Q05722 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.87□□□□□ -0.35
Col9a1Q05722 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Col9a1Q05722 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC12.87□□□□□ -0.35
Col9a1Q05722 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC12.87□□□□□ -0.35
Col9a1Q05722 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.87□□□□□ -0.35
Col9a1Q05722 Lgi3-203ENSMUST00000226548 1001 ntBASIC12.87□□□□□ -0.35
Col9a1Q05722 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col9a1Q05722 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Col9a1Q05722 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col9a1Q05722 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col9a1Q05722 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col9a1Q05722 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col9a1Q05722 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
Col9a1Q05722 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col9a1Q05722 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col9a1Q05722 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col9a1Q05722 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col9a1Q05722 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col9a1Q05722 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col9a1Q05722 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col9a1Q05722 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Col9a1Q05722 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC12.87□□□□□ -0.35
Col9a1Q05722 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col9a1Q05722 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col9a1Q05722 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col9a1Q05722 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col9a1Q05722 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col9a1Q05722 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col9a1Q05722 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col9a1Q05722 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col9a1Q05722 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.86□□□□□ -0.35
Col9a1Q05722 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC12.86□□□□□ -0.35
Col9a1Q05722 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.86□□□□□ -0.35
Col9a1Q05722 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col9a1Q05722 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col9a1Q05722 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.86□□□□□ -0.35
Col9a1Q05722 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.86□□□□□ -0.35
Col9a1Q05722 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col9a1Q05722 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col9a1Q05722 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Col9a1Q05722 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col9a1Q05722 Gm14314-201ENSMUST00000118225 1015 ntBASIC12.86□□□□□ -0.35
Col9a1Q05722 Gm12380-201ENSMUST00000119012 544 ntBASIC12.86□□□□□ -0.35
Col9a1Q05722 Gm11835-201ENSMUST00000120635 663 ntBASIC12.86□□□□□ -0.35
Col9a1Q05722 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col9a1Q05722 Ptma-202ENSMUST00000186255 768 ntTSL 2 BASIC12.86□□□□□ -0.35
Col9a1Q05722 Gm34701-202ENSMUST00000204685 360 ntBASIC12.86□□□□□ -0.35
Col9a1Q05722 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC12.86□□□□□ -0.35
Col9a1Q05722 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC12.86□□□□□ -0.35
Col9a1Q05722 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Col9a1Q05722 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col9a1Q05722 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col9a1Q05722 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col9a1Q05722 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col9a1Q05722 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col9a1Q05722 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col9a1Q05722 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col9a1Q05722 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col9a1Q05722 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col9a1Q05722 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col9a1Q05722 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col9a1Q05722 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col9a1Q05722 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col9a1Q05722 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Col9a1Q05722 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col9a1Q05722 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.85□□□□□ -0.35
Col9a1Q05722 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.85□□□□□ -0.35
Col9a1Q05722 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col9a1Q05722 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Col9a1Q05722 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col9a1Q05722 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col9a1Q05722 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col9a1Q05722 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col9a1Q05722 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col9a1Q05722 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col9a1Q05722 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.85□□□□□ -0.35
Col9a1Q05722 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Col9a1Q05722 Gm15770-201ENSMUST00000117498 584 ntBASIC12.85□□□□□ -0.35
Col9a1Q05722 Gm13700-201ENSMUST00000118624 1128 ntBASIC12.85□□□□□ -0.35
Col9a1Q05722 Gm15711-201ENSMUST00000118889 535 ntBASIC12.85□□□□□ -0.35
Col9a1Q05722 Gm11877-201ENSMUST00000118921 852 ntBASIC12.85□□□□□ -0.35
Col9a1Q05722 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.85□□□□□ -0.35
Col9a1Q05722 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col9a1Q05722 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC12.85□□□□□ -0.35
Col9a1Q05722 Gm8582-201ENSMUST00000164061 789 ntBASIC12.85□□□□□ -0.35
Col9a1Q05722 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col9a1Q05722 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Col9a1Q05722 Gm7211-201ENSMUST00000172692 1118 ntBASIC12.85□□□□□ -0.35
Col9a1Q05722 Gm22693-201ENSMUST00000175049 442 ntBASIC12.85□□□□□ -0.35
Col9a1Q05722 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Col9a1Q05722 Gm9625-201ENSMUST00000180422 955 ntBASIC12.85□□□□□ -0.35
Col9a1Q05722 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col9a1Q05722 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col9a1Q05722 Gm5904-201ENSMUST00000210286 865 ntBASIC12.85□□□□□ -0.35
Col9a1Q05722 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 131.9 ms