Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col6a2Q02788 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Col6a2Q02788 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Col6a2Q02788 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.96□□□□□ -0.34
Col6a2Q02788 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.96□□□□□ -0.34
Col6a2Q02788 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a2Q02788 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.95□□□□□ -0.34
Col6a2Q02788 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a2Q02788 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a2Q02788 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Col6a2Q02788 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a2Q02788 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a2Q02788 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Col6a2Q02788 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a2Q02788 Grk6-205ENSMUST00000224653 2976 ntBASIC12.95□□□□□ -0.34
Col6a2Q02788 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.95□□□□□ -0.34
Col6a2Q02788 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a2Q02788 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.95□□□□□ -0.34
Col6a2Q02788 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.95□□□□□ -0.34
Col6a2Q02788 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.95□□□□□ -0.34
Col6a2Q02788 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.95□□□□□ -0.34
Col6a2Q02788 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
Col6a2Q02788 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Col6a2Q02788 Gm43179-201ENSMUST00000198797 275 ntBASIC12.95□□□□□ -0.34
Col6a2Q02788 Gm43118-201ENSMUST00000199149 775 ntBASIC12.95□□□□□ -0.34
Col6a2Q02788 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a2Q02788 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a2Q02788 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a2Q02788 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Col6a2Q02788 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a2Q02788 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.95□□□□□ -0.34
Col6a2Q02788 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Col6a2Q02788 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a2Q02788 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a2Q02788 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a2Q02788 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a2Q02788 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a2Q02788 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Col6a2Q02788 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Col6a2Q02788 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a2Q02788 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Col6a2Q02788 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.94□□□□□ -0.34
Col6a2Q02788 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a2Q02788 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a2Q02788 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Col6a2Q02788 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a2Q02788 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Col6a2Q02788 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Col6a2Q02788 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.94□□□□□ -0.34
Col6a2Q02788 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.94□□□□□ -0.34
Col6a2Q02788 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a2Q02788 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.94□□□□□ -0.34
Col6a2Q02788 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a2Q02788 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a2Q02788 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a2Q02788 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a2Q02788 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a2Q02788 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.94□□□□□ -0.34
Col6a2Q02788 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Col6a2Q02788 Gm6023-201ENSMUST00000118217 606 ntBASIC12.94□□□□□ -0.34
Col6a2Q02788 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a2Q02788 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.94□□□□□ -0.34
Col6a2Q02788 Gm27501-201ENSMUST00000183599 107 ntBASIC12.94□□□□□ -0.34
Col6a2Q02788 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.94□□□□□ -0.34
Col6a2Q02788 Gm42627-201ENSMUST00000197347 224 ntBASIC12.94□□□□□ -0.34
Col6a2Q02788 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.94□□□□□ -0.34
Col6a2Q02788 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a2Q02788 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a2Q02788 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a2Q02788 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Col6a2Q02788 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Col6a2Q02788 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a2Q02788 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a2Q02788 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a2Q02788 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a2Q02788 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a2Q02788 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Col6a2Q02788 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Col6a2Q02788 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Col6a2Q02788 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col6a2Q02788 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Col6a2Q02788 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a2Q02788 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a2Q02788 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Col6a2Q02788 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Col6a2Q02788 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Col6a2Q02788 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.93□□□□□ -0.34
Col6a2Q02788 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a2Q02788 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a2Q02788 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a2Q02788 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a2Q02788 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a2Q02788 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Col6a2Q02788 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.93□□□□□ -0.34
Col6a2Q02788 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a2Q02788 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col6a2Q02788 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Col6a2Q02788 Gm14704-201ENSMUST00000120300 874 ntBASIC12.93□□□□□ -0.34
Col6a2Q02788 Gm11793-201ENSMUST00000120433 981 ntBASIC12.93□□□□□ -0.34
Col6a2Q02788 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms