Protein–RNA interactions for Protein: P97326

Cdh6, Cadherin-6, mousemouse

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh6P97326 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.15□□□□□ -0.3
Cdh6P97326 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.15□□□□□ -0.3
Cdh6P97326 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Cdh6P97326 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh6P97326 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh6P97326 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh6P97326 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.15□□□□□ -0.3
Cdh6P97326 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cdh6P97326 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh6P97326 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.15□□□□□ -0.3
Cdh6P97326 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh6P97326 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cdh6P97326 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.15□□□□□ -0.31
Cdh6P97326 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.15□□□□□ -0.31
Cdh6P97326 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Cdh6P97326 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cdh6P97326 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Cdh6P97326 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cdh6P97326 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cdh6P97326 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh6P97326 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Cdh6P97326 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.14□□□□□ -0.31
Cdh6P97326 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.14□□□□□ -0.31
Cdh6P97326 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh6P97326 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Cdh6P97326 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.14□□□□□ -0.31
Cdh6P97326 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh6P97326 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh6P97326 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh6P97326 Gm15824-201ENSMUST00000119516 955 ntBASIC13.14□□□□□ -0.31
Cdh6P97326 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.14□□□□□ -0.31
Cdh6P97326 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh6P97326 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.14□□□□□ -0.31
Cdh6P97326 Gm37042-201ENSMUST00000193816 581 ntBASIC13.14□□□□□ -0.31
Cdh6P97326 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh6P97326 Gm43818-201ENSMUST00000200605 466 ntBASIC13.14□□□□□ -0.31
Cdh6P97326 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh6P97326 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.14□□□□□ -0.31
Cdh6P97326 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Cdh6P97326 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh6P97326 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cdh6P97326 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Cdh6P97326 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh6P97326 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cdh6P97326 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh6P97326 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh6P97326 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh6P97326 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.14□□□□□ -0.31
Cdh6P97326 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.14□□□□□ -0.31
Cdh6P97326 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh6P97326 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh6P97326 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh6P97326 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Cdh6P97326 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.13□□□□□ -0.31
Cdh6P97326 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh6P97326 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh6P97326 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh6P97326 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Cdh6P97326 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh6P97326 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh6P97326 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh6P97326 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh6P97326 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh6P97326 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh6P97326 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh6P97326 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh6P97326 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh6P97326 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh6P97326 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Cdh6P97326 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh6P97326 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh6P97326 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh6P97326 Gm16177-201ENSMUST00000120728 718 ntBASIC13.13□□□□□ -0.31
Cdh6P97326 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.13□□□□□ -0.31
Cdh6P97326 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Cdh6P97326 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh6P97326 Gm26927-201ENSMUST00000182385 965 ntBASIC13.13□□□□□ -0.31
Cdh6P97326 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh6P97326 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.13□□□□□ -0.31
Cdh6P97326 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.13□□□□□ -0.31
Cdh6P97326 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.13□□□□□ -0.31
Cdh6P97326 Gm6266-201ENSMUST00000203844 806 ntBASIC13.13□□□□□ -0.31
Cdh6P97326 Gm4768-201ENSMUST00000206199 686 ntBASIC13.13□□□□□ -0.31
Cdh6P97326 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.13□□□□□ -0.31
Cdh6P97326 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh6P97326 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh6P97326 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh6P97326 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.13□□□□□ -0.31
Cdh6P97326 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh6P97326 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh6P97326 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Cdh6P97326 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh6P97326 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh6P97326 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Cdh6P97326 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh6P97326 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh6P97326 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh6P97326 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh6P97326 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh6P97326 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms