Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cux2P70298 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cux2P70298 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cux2P70298 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cux2P70298 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cux2P70298 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cux2P70298 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Cux2P70298 Gm12990-201ENSMUST00000120372 468 ntBASIC20.78■□□□□ 0.92
Cux2P70298 Gm11980-201ENSMUST00000121445 986 ntBASIC20.78■□□□□ 0.92
Cux2P70298 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cux2P70298 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Cux2P70298 Gm44158-201ENSMUST00000203881 505 ntBASIC20.78■□□□□ 0.92
Cux2P70298 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cux2P70298 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cux2P70298 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Cux2P70298 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cux2P70298 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cux2P70298 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC20.78■□□□□ 0.92
Cux2P70298 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cux2P70298 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cux2P70298 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Cux2P70298 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC20.77■□□□□ 0.92
Cux2P70298 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cux2P70298 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cux2P70298 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Cux2P70298 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cux2P70298 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cux2P70298 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cux2P70298 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cux2P70298 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cux2P70298 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
Cux2P70298 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC20.77■□□□□ 0.91
Cux2P70298 Gm43692-201ENSMUST00000198236 1062 ntBASIC20.77■□□□□ 0.91
Cux2P70298 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC20.77■□□□□ 0.91
Cux2P70298 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Cux2P70298 Gm6430-201ENSMUST00000054664 1248 ntBASIC20.77■□□□□ 0.91
Cux2P70298 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Cux2P70298 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC20.77■□□□□ 0.91
Cux2P70298 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cux2P70298 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cux2P70298 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Cux2P70298 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cux2P70298 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cux2P70298 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Cux2P70298 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cux2P70298 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cux2P70298 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cux2P70298 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cux2P70298 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cux2P70298 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Cux2P70298 CT025610.1-201ENSMUST00000224552 1786 ntBASIC20.76■□□□□ 0.91
Cux2P70298 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC20.76■□□□□ 0.91
Cux2P70298 AC171277.1-201ENSMUST00000216902 1441 ntBASIC20.76■□□□□ 0.91
Cux2P70298 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cux2P70298 Gm13394-201ENSMUST00000121658 1000 ntBASIC20.76■□□□□ 0.91
Cux2P70298 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
Cux2P70298 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC20.76■□□□□ 0.91
Cux2P70298 Gm7902-201ENSMUST00000198842 947 ntBASIC20.76■□□□□ 0.91
Cux2P70298 Gm6722-201ENSMUST00000221586 390 ntBASIC20.76■□□□□ 0.91
Cux2P70298 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cux2P70298 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Cux2P70298 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cux2P70298 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cux2P70298 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC20.75■□□□□ 0.91
Cux2P70298 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cux2P70298 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
Cux2P70298 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cux2P70298 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC20.75■□□□□ 0.91
Cux2P70298 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cux2P70298 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC20.75■□□□□ 0.91
Cux2P70298 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cux2P70298 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cux2P70298 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cux2P70298 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cux2P70298 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC20.75■□□□□ 0.91
Cux2P70298 Gm22442-201ENSMUST00000157256 144 ntBASIC20.75■□□□□ 0.91
Cux2P70298 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cux2P70298 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Cux2P70298 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cux2P70298 Gm23045-201ENSMUST00000175041 96 ntBASIC20.75■□□□□ 0.91
Cux2P70298 Gm22877-201ENSMUST00000175451 105 ntBASIC20.75■□□□□ 0.91
Cux2P70298 Gm43186-201ENSMUST00000198130 824 ntBASIC20.75■□□□□ 0.91
Cux2P70298 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC20.75■□□□□ 0.91
Cux2P70298 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC20.75■□□□□ 0.91
Cux2P70298 AC126799.1-201ENSMUST00000221976 246 ntBASIC20.75■□□□□ 0.91
Cux2P70298 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cux2P70298 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cux2P70298 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cux2P70298 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cux2P70298 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC20.75■□□□□ 0.91
Cux2P70298 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cux2P70298 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cux2P70298 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cux2P70298 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cux2P70298 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cux2P70298 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cux2P70298 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cux2P70298 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cux2P70298 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cux2P70298 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms