Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pfn1P62962 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pfn1P62962 Gm6157-201ENSMUST00000199935 1897 ntBASIC10.06□□□□□ -0.8
Pfn1P62962 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pfn1P62962 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pfn1P62962 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pfn1P62962 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pfn1P62962 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Pfn1P62962 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Pfn1P62962 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Pfn1P62962 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pfn1P62962 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Pfn1P62962 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pfn1P62962 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC10.06□□□□□ -0.8
Pfn1P62962 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pfn1P62962 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pfn1P62962 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Pfn1P62962 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC10.06□□□□□ -0.8
Pfn1P62962 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Pfn1P62962 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC10.06□□□□□ -0.8
Pfn1P62962 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC10.06□□□□□ -0.8
Pfn1P62962 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC10.06□□□□□ -0.8
Pfn1P62962 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC10.06□□□□□ -0.8
Pfn1P62962 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC10.06□□□□□ -0.8
Pfn1P62962 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC10.06□□□□□ -0.8
Pfn1P62962 Gm6916-202ENSMUST00000205523 195 ntBASIC10.06□□□□□ -0.8
Pfn1P62962 Dupd1-202ENSMUST00000224735 548 ntBASIC10.06□□□□□ -0.8
Pfn1P62962 AC090659.2-201ENSMUST00000225378 1186 ntBASIC10.06□□□□□ -0.8
Pfn1P62962 AC154806.6-201ENSMUST00000228192 202 ntBASIC10.06□□□□□ -0.8
Pfn1P62962 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pfn1P62962 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Pfn1P62962 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pfn1P62962 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pfn1P62962 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Pfn1P62962 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pfn1P62962 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pfn1P62962 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Pfn1P62962 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pfn1P62962 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Pfn1P62962 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.06□□□□□ -0.8
Pfn1P62962 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pfn1P62962 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC10.06□□□□□ -0.8
Pfn1P62962 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pfn1P62962 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Pfn1P62962 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Pfn1P62962 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Pfn1P62962 AC211878.3-201ENSMUST00000222629 2018 ntBASIC10.06□□□□□ -0.8
Pfn1P62962 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pfn1P62962 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC10.05□□□□□ -0.8
Pfn1P62962 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pfn1P62962 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pfn1P62962 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pfn1P62962 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pfn1P62962 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Pfn1P62962 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pfn1P62962 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Pfn1P62962 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Pfn1P62962 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Pfn1P62962 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pfn1P62962 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pfn1P62962 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.05□□□□□ -0.8
Pfn1P62962 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Pfn1P62962 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pfn1P62962 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pfn1P62962 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC10.05□□□□□ -0.8
Pfn1P62962 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Pfn1P62962 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pfn1P62962 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Pfn1P62962 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pfn1P62962 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pfn1P62962 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pfn1P62962 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC10.05□□□□□ -0.8
Pfn1P62962 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC10.05□□□□□ -0.8
Pfn1P62962 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Pfn1P62962 Gm7063-201ENSMUST00000186840 981 ntBASIC10.05□□□□□ -0.8
Pfn1P62962 Gm18766-201ENSMUST00000189811 808 ntBASIC10.05□□□□□ -0.8
Pfn1P62962 Gm33320-201ENSMUST00000192232 530 ntBASIC10.05□□□□□ -0.8
Pfn1P62962 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Pfn1P62962 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC10.05□□□□□ -0.8
Pfn1P62962 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC10.05□□□□□ -0.8
Pfn1P62962 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Pfn1P62962 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pfn1P62962 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pfn1P62962 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pfn1P62962 Gm10175-201ENSMUST00000086013 645 ntBASIC10.05□□□□□ -0.8
Pfn1P62962 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Pfn1P62962 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC10.05□□□□□ -0.8
Pfn1P62962 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pfn1P62962 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pfn1P62962 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Pfn1P62962 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Pfn1P62962 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pfn1P62962 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Pfn1P62962 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pfn1P62962 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pfn1P62962 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pfn1P62962 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC10.05□□□□□ -0.8
Pfn1P62962 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pfn1P62962 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Pfn1P62962 Gm43721-201ENSMUST00000199677 2313 ntBASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms