Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.28□□□□□ -0.28
Ybx1P62960 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ybx1P62960 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ybx1P62960 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ybx1P62960 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ybx1P62960 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ybx1P62960 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ybx1P62960 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.28□□□□□ -0.28
Ybx1P62960 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ybx1P62960 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ybx1P62960 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ybx1P62960 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ybx1P62960 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ybx1P62960 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ybx1P62960 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ybx1P62960 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ybx1P62960 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ybx1P62960 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ybx1P62960 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ybx1P62960 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ybx1P62960 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ybx1P62960 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.27□□□□□ -0.28
Ybx1P62960 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ybx1P62960 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ybx1P62960 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ybx1P62960 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
Ybx1P62960 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Ybx1P62960 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.27□□□□□ -0.28
Ybx1P62960 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Ybx1P62960 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ybx1P62960 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ybx1P62960 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ybx1P62960 Gm2546-201ENSMUST00000182630 991 ntBASIC13.27□□□□□ -0.29
Ybx1P62960 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13.27□□□□□ -0.29
Ybx1P62960 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC13.27□□□□□ -0.29
Ybx1P62960 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.27□□□□□ -0.29
Ybx1P62960 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ybx1P62960 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ybx1P62960 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ybx1P62960 Gm44967-201ENSMUST00000207047 631 ntBASIC13.27□□□□□ -0.29
Ybx1P62960 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC13.27□□□□□ -0.29
Ybx1P62960 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.27□□□□□ -0.29
Ybx1P62960 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ybx1P62960 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ybx1P62960 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ybx1P62960 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ybx1P62960 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
Ybx1P62960 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ybx1P62960 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.27□□□□□ -0.29
Ybx1P62960 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.27□□□□□ -0.29
Ybx1P62960 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ybx1P62960 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ybx1P62960 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ybx1P62960 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ybx1P62960 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ybx1P62960 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Ybx1P62960 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ybx1P62960 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Ybx1P62960 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ybx1P62960 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Ybx1P62960 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ybx1P62960 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ybx1P62960 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
Ybx1P62960 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Ybx1P62960 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ybx1P62960 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ybx1P62960 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ybx1P62960 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ybx1P62960 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.26□□□□□ -0.29
Ybx1P62960 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ybx1P62960 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Ybx1P62960 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.26□□□□□ -0.29
Ybx1P62960 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ybx1P62960 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.26□□□□□ -0.29
Ybx1P62960 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ybx1P62960 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.26□□□□□ -0.29
Ybx1P62960 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Ybx1P62960 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.26□□□□□ -0.29
Ybx1P62960 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ybx1P62960 Gm10782-202ENSMUST00000223775 1480 ntBASIC13.26□□□□□ -0.29
Ybx1P62960 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ybx1P62960 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ybx1P62960 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ybx1P62960 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ybx1P62960 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ybx1P62960 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ybx1P62960 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ybx1P62960 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ybx1P62960 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ybx1P62960 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ybx1P62960 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ybx1P62960 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Ybx1P62960 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ybx1P62960 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ybx1P62960 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ybx1P62960 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Ybx1P62960 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ybx1P62960 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.26□□□□□ -0.29
Ybx1P62960 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ybx1P62960 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms