Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Msh6P54276 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Msh6P54276 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Msh6P54276 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
Msh6P54276 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC16.33■□□□□ 0.21
Msh6P54276 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Msh6P54276 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Msh6P54276 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Msh6P54276 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC16.33■□□□□ 0.2
Msh6P54276 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC16.33■□□□□ 0.2
Msh6P54276 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Msh6P54276 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC16.33■□□□□ 0.2
Msh6P54276 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC16.33■□□□□ 0.2
Msh6P54276 Gm5904-201ENSMUST00000210286 865 ntBASIC16.33■□□□□ 0.2
Msh6P54276 AC153974.2-201ENSMUST00000218577 1025 ntBASIC16.33■□□□□ 0.2
Msh6P54276 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Msh6P54276 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Msh6P54276 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Msh6P54276 Gm22058-201ENSMUST00000083393 310 ntBASIC16.33■□□□□ 0.2
Msh6P54276 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Msh6P54276 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Msh6P54276 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Msh6P54276 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Msh6P54276 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Msh6P54276 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Msh6P54276 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Msh6P54276 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Msh6P54276 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Msh6P54276 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Msh6P54276 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Msh6P54276 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Msh6P54276 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Msh6P54276 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Msh6P54276 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Msh6P54276 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Msh6P54276 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Msh6P54276 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC16.32■□□□□ 0.2
Msh6P54276 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Msh6P54276 Gm12058-201ENSMUST00000118614 437 ntBASIC16.32■□□□□ 0.2
Msh6P54276 Gm11331-201ENSMUST00000119764 288 ntBASIC16.32■□□□□ 0.2
Msh6P54276 Gm8546-201ENSMUST00000178288 1264 ntBASIC16.32■□□□□ 0.2
Msh6P54276 Gm8856-201ENSMUST00000185254 1144 ntBASIC16.32■□□□□ 0.2
Msh6P54276 Gm43378-201ENSMUST00000199336 582 ntBASIC16.32■□□□□ 0.2
Msh6P54276 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC16.32■□□□□ 0.2
Msh6P54276 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC16.32■□□□□ 0.2
Msh6P54276 CT009718.3-201ENSMUST00000221116 367 ntBASIC16.32■□□□□ 0.2
Msh6P54276 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Msh6P54276 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Msh6P54276 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Msh6P54276 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC16.32■□□□□ 0.2
Msh6P54276 Gm5884-201ENSMUST00000036712 1479 ntBASIC16.32■□□□□ 0.2
Msh6P54276 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Msh6P54276 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Msh6P54276 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Msh6P54276 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Msh6P54276 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Msh6P54276 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC16.32■□□□□ 0.2
Msh6P54276 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Msh6P54276 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Msh6P54276 Gm37691-201ENSMUST00000192147 2573 ntBASIC16.32■□□□□ 0.2
Msh6P54276 Gm38346-201ENSMUST00000192379 2639 ntBASIC16.32■□□□□ 0.2
Msh6P54276 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Msh6P54276 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Msh6P54276 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Msh6P54276 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Msh6P54276 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msh6P54276 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Msh6P54276 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msh6P54276 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msh6P54276 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC16.31■□□□□ 0.2
Msh6P54276 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Msh6P54276 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msh6P54276 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Msh6P54276 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msh6P54276 Gm44851-201ENSMUST00000205735 2309 ntBASIC16.31■□□□□ 0.2
Msh6P54276 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Msh6P54276 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC16.31■□□□□ 0.2
Msh6P54276 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Msh6P54276 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Msh6P54276 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Msh6P54276 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msh6P54276 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC16.31■□□□□ 0.2
Msh6P54276 Gm14921-201ENSMUST00000118643 908 ntBASIC16.31■□□□□ 0.2
Msh6P54276 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC16.31■□□□□ 0.2
Msh6P54276 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC16.31■□□□□ 0.2
Msh6P54276 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC16.31■□□□□ 0.2
Msh6P54276 Gm14267-206ENSMUST00000226870 1209 ntBASIC16.31■□□□□ 0.2
Msh6P54276 AC113031.8-201ENSMUST00000227856 631 ntBASIC16.31■□□□□ 0.2
Msh6P54276 AC123665.1-201ENSMUST00000228204 438 ntBASIC16.31■□□□□ 0.2
Msh6P54276 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msh6P54276 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Msh6P54276 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msh6P54276 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msh6P54276 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Msh6P54276 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC16.31■□□□□ 0.2
Msh6P54276 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.31■□□□□ 0.2
Msh6P54276 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Msh6P54276 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msh6P54276 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Msh6P54276 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms