Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lbx1P52955 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.55□□□□□ -0.4
Lbx1P52955 Gm11451-201ENSMUST00000118946 630 ntBASIC12.55□□□□□ -0.4
Lbx1P52955 Gm11941-201ENSMUST00000119904 610 ntBASIC12.55□□□□□ -0.4
Lbx1P52955 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC12.55□□□□□ -0.4
Lbx1P52955 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Lbx1P52955 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC12.55□□□□□ -0.4
Lbx1P52955 Gm5340-201ENSMUST00000203733 880 ntBASIC12.55□□□□□ -0.4
Lbx1P52955 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.55□□□□□ -0.4
Lbx1P52955 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC12.55□□□□□ -0.4
Lbx1P52955 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.55□□□□□ -0.4
Lbx1P52955 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.55□□□□□ -0.4
Lbx1P52955 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.55□□□□□ -0.4
Lbx1P52955 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lbx1P52955 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Lbx1P52955 n-R5s211-201ENSMUST00000093689 119 ntBASIC12.55□□□□□ -0.4
Lbx1P52955 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lbx1P52955 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lbx1P52955 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lbx1P52955 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lbx1P52955 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.55□□□□□ -0.4
Lbx1P52955 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Lbx1P52955 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lbx1P52955 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Lbx1P52955 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Lbx1P52955 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lbx1P52955 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Lbx1P52955 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lbx1P52955 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Lbx1P52955 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Lbx1P52955 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lbx1P52955 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Lbx1P52955 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lbx1P52955 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lbx1P52955 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Lbx1P52955 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lbx1P52955 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lbx1P52955 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lbx1P52955 Gm13549-201ENSMUST00000118339 796 ntBASIC12.54□□□□□ -0.4
Lbx1P52955 Gm14219-201ENSMUST00000120414 288 ntBASIC12.54□□□□□ -0.4
Lbx1P52955 Gm11246-201ENSMUST00000120880 345 ntBASIC12.54□□□□□ -0.4
Lbx1P52955 Gm6963-201ENSMUST00000147879 379 ntBASIC12.54□□□□□ -0.4
Lbx1P52955 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.54□□□□□ -0.4
Lbx1P52955 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.54□□□□□ -0.4
Lbx1P52955 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Lbx1P52955 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lbx1P52955 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Lbx1P52955 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Lbx1P52955 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Lbx1P52955 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.54□□□□□ -0.4
Lbx1P52955 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lbx1P52955 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lbx1P52955 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lbx1P52955 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lbx1P52955 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Lbx1P52955 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lbx1P52955 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lbx1P52955 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.54□□□□□ -0.4
Lbx1P52955 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lbx1P52955 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lbx1P52955 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lbx1P52955 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lbx1P52955 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lbx1P52955 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lbx1P52955 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.54□□□□□ -0.4
Lbx1P52955 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lbx1P52955 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Lbx1P52955 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Lbx1P52955 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lbx1P52955 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Lbx1P52955 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Lbx1P52955 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lbx1P52955 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Lbx1P52955 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lbx1P52955 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lbx1P52955 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lbx1P52955 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lbx1P52955 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lbx1P52955 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lbx1P52955 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lbx1P52955 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Lbx1P52955 Gm6447-201ENSMUST00000118905 835 ntBASIC12.53□□□□□ -0.4
Lbx1P52955 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.53□□□□□ -0.4
Lbx1P52955 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lbx1P52955 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.53□□□□□ -0.4
Lbx1P52955 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.53□□□□□ -0.4
Lbx1P52955 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lbx1P52955 Gm35960-201ENSMUST00000202712 767 ntBASIC12.53□□□□□ -0.4
Lbx1P52955 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC12.53□□□□□ -0.4
Lbx1P52955 Ginm1-202ENSMUST00000065124 300 ntBASIC12.53□□□□□ -0.4
Lbx1P52955 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Lbx1P52955 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.53□□□□□ -0.4
Lbx1P52955 Gm3283-201ENSMUST00000199319 1350 ntBASIC12.53□□□□□ -0.4
Lbx1P52955 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lbx1P52955 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.53□□□□□ -0.4
Lbx1P52955 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lbx1P52955 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lbx1P52955 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Lbx1P52955 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lbx1P52955 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms