Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx2-1P50220 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Nkx2-1P50220 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx2-1P50220 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Nkx2-1P50220 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx2-1P50220 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx2-1P50220 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx2-1P50220 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx2-1P50220 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC10.76□□□□□ -0.69
Nkx2-1P50220 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Nkx2-1P50220 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.76□□□□□ -0.69
Nkx2-1P50220 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx2-1P50220 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx2-1P50220 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx2-1P50220 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx2-1P50220 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx2-1P50220 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx2-1P50220 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx2-1P50220 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx2-1P50220 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx2-1P50220 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx2-1P50220 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx2-1P50220 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx2-1P50220 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx2-1P50220 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx2-1P50220 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx2-1P50220 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx2-1P50220 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx2-1P50220 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx2-1P50220 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx2-1P50220 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC10.75□□□□□ -0.69
Nkx2-1P50220 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx2-1P50220 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx2-1P50220 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx2-1P50220 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx2-1P50220 Gm9025-201ENSMUST00000122415 1575 ntBASIC10.75□□□□□ -0.69
Nkx2-1P50220 AC113060.1-201ENSMUST00000225689 1573 ntBASIC10.75□□□□□ -0.69
Nkx2-1P50220 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx2-1P50220 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.75□□□□□ -0.69
Nkx2-1P50220 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Nkx2-1P50220 Gm13886-201ENSMUST00000117876 1183 ntBASIC10.75□□□□□ -0.69
Nkx2-1P50220 Mir1897-201ENSMUST00000122581 272 ntBASIC10.75□□□□□ -0.69
Nkx2-1P50220 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC10.75□□□□□ -0.69
Nkx2-1P50220 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC10.75□□□□□ -0.69
Nkx2-1P50220 Gm25948-201ENSMUST00000175334 112 ntBASIC10.75□□□□□ -0.69
Nkx2-1P50220 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx2-1P50220 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC10.75□□□□□ -0.69
Nkx2-1P50220 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC10.75□□□□□ -0.69
Nkx2-1P50220 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC10.75□□□□□ -0.69
Nkx2-1P50220 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
Nkx2-1P50220 Gm17330-201ENSMUST00000221047 165 ntBASIC10.75□□□□□ -0.69
Nkx2-1P50220 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx2-1P50220 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx2-1P50220 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx2-1P50220 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx2-1P50220 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Nkx2-1P50220 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Nkx2-1P50220 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx2-1P50220 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx2-1P50220 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC10.75□□□□□ -0.69
Nkx2-1P50220 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx2-1P50220 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC10.75□□□□□ -0.69
Nkx2-1P50220 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx2-1P50220 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx2-1P50220 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx2-1P50220 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC10.75□□□□□ -0.69
Nkx2-1P50220 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx2-1P50220 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC10.75□□□□□ -0.69
Nkx2-1P50220 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx2-1P50220 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC10.75□□□□□ -0.69
Nkx2-1P50220 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx2-1P50220 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.75□□□□□ -0.69
Nkx2-1P50220 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx2-1P50220 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx2-1P50220 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx2-1P50220 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Nkx2-1P50220 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx2-1P50220 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Nkx2-1P50220 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC10.74□□□□□ -0.69
Nkx2-1P50220 Gm37391-201ENSMUST00000194891 2318 ntBASIC10.74□□□□□ -0.69
Nkx2-1P50220 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx2-1P50220 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx2-1P50220 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx2-1P50220 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx2-1P50220 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx2-1P50220 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx2-1P50220 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx2-1P50220 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx2-1P50220 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC10.74□□□□□ -0.69
Nkx2-1P50220 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC10.74□□□□□ -0.69
Nkx2-1P50220 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx2-1P50220 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
Nkx2-1P50220 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC10.74□□□□□ -0.69
Nkx2-1P50220 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx2-1P50220 Gm27772-201ENSMUST00000184900 187 ntBASIC10.74□□□□□ -0.69
Nkx2-1P50220 Gm19817-201ENSMUST00000199764 2132 ntBASIC10.74□□□□□ -0.69
Nkx2-1P50220 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC10.74□□□□□ -0.69
Nkx2-1P50220 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx2-1P50220 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx2-1P50220 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms